Job Description P77150 Confidence 99.70% Date Wed Jan 25 15:21:10 GMT 2012 Rank 47 Aligned Residues 217 % Identity 18% Template c2r3bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:yjef-related protein; PDBTitle: crystal structure of a ribokinase-like superfamily protein (ef1790)2 from enterococcus faecalis v583 at 1.80 a resolution Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	A	I	Q	S	H	V	V	Y	G	H	A	G	N	S	A	A	E	F	P	M	R	R	L	G	A	N	V	W	P	L	N	T	V	Q	F	S	N	H	T	Q	Y	G	K	W	T	G	C	V	M	P	P	S	H	L	T	E	I	V	Q	G	I	A	A	I	D	K	L	H	T	C	D	A	V	L	S	G	Y
Query Conservation
Alig confidence																											.																																									.	.	.	.	.
Template Conservation																											.																																									.	.	.	.	.
Template Sequence		R	V	V	L	I	G	G	N	R	Q	Y	G	G	A	I	I	X	S	T	E	A	C	I	N	S	.	G	A	G	L	T	T	V	I	T	D	V	K	N	H	G	P	L	H	A	R	C	P	E	A	X	V	V	G	F	E	E	T	V	L	L	T	N	V	V	E	.	.	.	.	.	Q	A	D	V	I	L	I	G	P
Template Known Secondary structure										S	S	S															.	T		S								G	G	G									T	T						T	T											.	.	.	.	.			S						T
Template Predicted Secondary structure																											.																																									.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100
			84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	G	S	A	E	Q	G	E	H	I	L	G	I	V	R	Q	V	K	A	A	N	P	Q	A	K	Y	F	C	D	P	V	M	G	H	P	E	K	G	C	I	V	A	P	G	V	A	E	F	H	V	R	H	G	L	P	A	S	D	I	I	A	P	N	L	V	E	L	E	I	L	C	E	H	A	V	N	N	V	E
Query Conservation		.
Alig confidence		.																						.	.	.	.	.	.	.																			.	.	.	.																											.	.
Template Conservation																								.	.	.	.	.	.	.																			.	.	.	.																											.	.
Template Sequence		G	L	G	L	D	A	T	A	Q	Q	I	L	K	X	V	L	A	Q	H	Q	K	Q	.	.	.	.	.	.	.	Q	W	L	I	I	D	G	S	A	I	T	L	F	S	Q	G	N	F	.	.	.	.	S	L	T	Y	P	E	K	V	V	F	T	P	H	Q	X	E	W	Q	R	L	S	H	L	P	I	E	.	.	Q
Template Known Secondary structure		T			S	S																T	T	.	.	.	.	.	.	.							T									T	T		.	.	.	.			S	S	G	G	G																		G	G	.	.	G
Template Predicted Secondary structure																								.	.	.	.	.	.	.																			.	.	.	.																											.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	V	L	A	A	R	E	L	I	A	Q	G	P	Q	I	V	L	V	K	H	L	A	R	A	G	Y	S	R	D	R	F	E	M	L	L	V	T	A	D	E	A	W	H	I	S	R	P	L	V	D	F	G	M	R	Q	P	V	G	V	G	D	V	T	S	G	L	L	L	V	K	L	L	Q	G	A	T	L	Q	E
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		Q	T	L	A	N	N	Q	R	Q	Q	A	K	L	G	S	T	I	V	L	K	S	H	R	.	.	.	.	.	.	.	.	.	.	T	T	I	F	H	A	G	E	P	F	Q	N	T	G	G	N	.	.	.	P	G	X	A	T	G	G	T	G	D	T	L	A	G	I	I	A	G	F	L	A	Q	F	K	P	T	I	E
Template Known Secondary structure															T	S						S	T	T	.	.	.	.	.	.	.	.	.	.						S	S	S									.	.	.	G	G	G		S	T	T																S		S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190											.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	H	V	T	A	A	V	Y	E
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		T	I	A	G	A	.	V	Y	L	H	S
Template Known Secondary structure							.
Template Predicted Secondary structure							.
Template SS confidence
		235	.	.	.	.		240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions