Job Description Q47679 Confidence 100.00% Date Thu Jan 5 12:36:58 GMT 2012 Rank 13 Aligned Residues 232 % Identity 21% Template c3n05B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																		.	.																													.	.	.	.	.	.	.
Query SS confidence																																		.	.																													.	.	.	.	.	.	.
Query Sequence		M	P	G	L	K	I	T	L	L	Q	Q	P	L	V	W	M	D	G	P	A	N	L	R	H	F	D	R	Q	L	E	G	I	.	.	T	G	R	D	V	I	V	L	P	E	M	F	T	S	G	F	A	M	E	A	A	A	S	S	L	A	Q	D	.	.	.	.	.	.	.	D	V	V	N	W	M	T	A	K	A	Q
Query Conservation																																		.	.																													.	.	.	.	.	.	.
Alig confidence				.																														.	.																													.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		L	Q	.	L	R	L	A	L	N	Q	I	D	S	T	V	G	D	I	A	G	N	A	E	A	I	L	R	W	T	R	H	S	A	E	Q	G	A	H	L	V	A	F	P	E	M	A	L	T	G	Y	P	V	E	D	L	A	L	R	S	S	F	V	E	A	S	R	T	A	L	R	E	L	A	A	R	L	A	E	E	G
Template Known Secondary structure		B		.												T	T																		T	T	T		S						T	T	T	T	T		S			G	G	G	G	G																						T	T
Template Predicted Secondary structure				.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.											.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		Q	C	N	A	L	I	A	G	S	V	A	L	Q	.	.	.	.	.	.	.	.	.	.	T	E	S	G	S	V	N	R	F	L	L	V	E	P	G	G	T	V	H	F	Y	D	K	R	H	L	.	.	F	R	M	A	D	E	H	L	H	Y	K	A	G	N	A	R	V	I	V	E	W	R	G	W	R	I	L	P	L
Query Conservation															.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		F	G	E	L	P	V	L	V	G	Y	L	D	R	S	E	S	A	Q	P	K	Y	G	Q	P	A	G	A	P	R	N	A	A	A	V	L	H	R	G	R	V	A	L	T	F	A	K	H	H	L	P	N	Y	G	V	F	D	E	F	R	Y	F	V	P	G	D	T	M	P	I	V	R	L	H	G	V	D	I	A	L	A
Template Known Secondary structure			T	T	S											S	S		B	T	T	T	T	B		T	T											T	T													S	S	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.		.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure										.							.	.												.	.
Query SS confidence										.							.	.												.	.
Query Sequence		V	C	Y	D	L	R	F	P	.	V	W	S	R	N	L	.	.	N	D	Y	D	L	A	L	Y	V	A	N	.	.	W	P	A	P	R	S	L	H	W	Q	A	L	L	T	A	R	A	I	E	N	Q	A	Y	V	A	G	C	N	R	V	G	S	D	G	N	G	C	H	Y	R	G	D	S	R	V	I	N	P	Q	G
Query Conservation										.							.	.												.	.
Alig confidence										.							.	.												.	.																																		.
Template Conservation																																																																	.
Template Sequence		I	C	E	D	L	W	Q	D	G	G	R	V	P	A	A	R	S	A	G	A	G	L	L	L	S	V	N	A	S	P	Y	E	R	D	K	D	D	T	R	L	E	L	V	R	K	R	A	Q	E	A	G	C	T	T	A	Y	L	A	M	I	G	G	Q	.	D	E	L	V	F	D	G	D	S	I	V	V	D	R	D	G
Template Known Secondary structure			G	G	G	G	G	S	T	T	S							T	T	T		S									B					S	S															T	S												.	T	T					B							S	S	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	I	A	T	A	D	A	H	Q	A	T	R	I	D	A	E	L	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	V	A	R	A	P	Q	F	S	E	G	C	V	V	L	D	L	D	L
Template Known Secondary structure									B	S	S										B
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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