Job Description Q47679 Confidence 100.00% Date Thu Jan 5 12:36:58 GMT 2012 Rank 14 Aligned Residues 239 % Identity 18% Template c3ilvA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii Resolution 1.79 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.
Predicted Secondary structure																																	.	.																												.															.
Query SS confidence																																	.	.																												.															.
Query Sequence		P	G	L	K	I	T	L	L	Q	Q	P	L	V	W	M	D	G	P	A	N	L	R	H	F	D	R	Q	L	E	G	I	.	.	T	G	R	D	V	I	V	L	P	E	M	F	T	S	G	F	A	M	E	A	A	A	S	S	L	A	Q	.	D	D	V	V	N	W	M	T	A	K	A	Q	Q	C	.	N	A	L	I
Query Conservation																																	.	.																												.															.
Alig confidence																																	.	.																												.															.
Template Conservation
Template Sequence		S	T	I	R	I	G	G	A	A	V	N	Q	T	P	I	D	W	E	N	N	V	K	N	I	L	D	A	I	E	E	A	K	N	A	N	V	E	I	L	C	L	P	E	L	C	I	T	G	Y	G	C	E	D	L	F	L	T	D	W	V	A	E	T	A	I	E	Y	C	F	E	I	A	A	S	C	T	D	I	T	V
Template Known Secondary structure															T	T																			T	T		S						T	T	T	T	T		S			G	G	G	G	G	S																T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	S	V	A	L	Q	T	E	S	G	S	V	N	R	F	L	L	V	E	P	G	G	T	V	H	F	Y	D	K	R	H	L	.	.	F	R	M	A	D	E	H	L	H	Y	K	A	G	N	A	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	E	W	R	G	W	R	I	L	P	L
Query Conservation																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	G	L	P	X	R	I	A	G	I	T	Y	N	C	V	C	L	V	E	N	G	I	V	K	G	F	S	A	K	Q	F	L	A	N	E	G	V	H	Y	E	T	R	W	F	T	A	W	P	R	N	H	T	T	T	F	L	Y	N	D	V	K	Y	P	F	G	D	V	L	Y	N	V	K	D	A	R	I	G	F	E
Template Known Secondary structure										T	T											T	T									S	S				S	T	T			G	G	G	T						T	T								T	T							S						T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		V	C	Y	D	L	R	F	P	V	W	S	R	N	L	N	D	Y	D	L	A	L	Y	V	A	N	W	P	A	P	.	.	R	S	L	H	W	Q	A	L	L	T	A	R	A	I	E	N	Q	A	Y	V	A	G	C	N	R	V	G	S	D	G	N	G	C	H	Y	R	G	D	S	R	V	I	N	P	Q	G	E	I	I
Query Conservation																															.	.
Alig confidence										.	.	.	.	.	.	.															.	.																																.
Template Conservation										.	.	.	.	.	.	.																																																.
Template Sequence		I	C	E	D	H	Y	E	K	.	.	.	.	.	.	.	G	A	T	L	V	L	N	P	S	A	S	H	F	A	F	G	K	S	A	I	R	Y	D	L	V	I	G	G	S	E	R	F	D	C	T	Y	V	Y	A	N	L	L	G	N	E	A	G	.	R	X	I	Y	D	G	E	V	L	I	A	H	K	G	K	L	I
Template Known Secondary structure			T	T			G	G	G	.	.	.	.	.	.	.	T		S									B			T	T																T	T	S											S	S	S	.	S												T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.																																																.
Template SS confidence
		162	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		218	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		A	T	A	D	A	H	Q	.	A	T	R	I	D	A	E	L	S	M	A	A	L	R	E	Y	R	E	K	F	P	A	W	Q
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		Q	R	N	D	R	L	S	F	K	N	V	N	L	I	Y	A	D	I	A	T	L	E	K	E	F	E	F	W	E	A	T	S
Template Known Secondary structure						S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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