Job Description Q47679 Confidence 100.00% Date Thu Jan 5 12:36:58 GMT 2012 Rank 12 Aligned Residues 241 % Identity 23% Template c3hkxA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidase; PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp. Resolution 1.66 Å

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		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure					.	.																															.	.																										.	.	.
Query SS confidence					.	.																															.	.																										.	.	.
Query Sequence		M	P	G	.	.	L	K	I	T	L	L	Q	Q	P	L	V	W	M	D	G	P	A	N	L	R	H	F	D	R	Q	L	E	G	I	T	.	.	G	R	D	V	I	V	L	P	E	M	F	T	S	G	F	A	M	E	A	A	A	S	S	L	A	.	.	.	Q	D	D	V	V	N	W	M	T	A	K	A	Q	Q	C
Query Conservation					.	.																															.	.																										.	.	.
Alig confidence					.	.																															.	.																										.	.	.
Template Conservation
Template Sequence		I	R	G	S	H	M	R	I	A	L	M	Q	H	T	A	R	P	L	D	P	Q	H	N	L	D	L	I	D	D	A	A	A	R	A	S	E	Q	G	A	Q	L	L	L	T	P	E	L	F	G	F	G	Y	V	P	S	Q	I	C	A	Q	V	S	A	E	Q	V	D	A	A	R	S	R	L	R	G	I	A	R	D	R
Template Known Secondary structure			T	T										B				T	T																			T	T		S						T	T	G	G	G		S																												T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure														.																		.
Query SS confidence														.																		.
Query Sequence		N	A	L	I	A	G	S	V	A	L	Q	T	.	E	S	G	S	V	N	R	F	L	L	V	E	P	G	G	T	V	.	H	F	Y	D	K	R	H	L	F	R	M	A	D	E	H	L	H	Y	K	A	G	N	A	R	V	I	V	E	W	R	G	W	R	I	L	P	L	V	C	Y	D	L	R	F	P	V	W	S	R
Query Conservation														.																		.
Alig confidence														.																		.
Template Conservation
Template Sequence		G	I	A	L	V	W	S	L	P	G	P	E	G	P	E	Q	R	G	I	T	A	E	L	A	D	E	H	G	E	V	L	A	S	Y	Q	K	V	Q	L	Y	G	P	E	E	K	A	A	F	V	P	G	E	Q	P	P	P	V	L	S	W	G	G	R	Q	L	S	L	L	V	C	Y	D	V	E	F	P	E	M	V	R
Template Known Secondary structure		T	S							B		S	S		T	T	T			B							T	T	S									S	S										S					S								T	T								G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
				152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	L	N	D	Y	D	L	A	L	Y	V	A	N	W	P	A	P	R	S	L	H	W	Q	A	L	L	T	A	R	A	I	E	N	Q	A	Y	V	A	G	C	N	R	V	G	S	D	G	N	G	C	H	Y	R	G	D	S	R	V	I	N	P	Q	G	E	I	I	A	T	A	D	A	H	Q	A	T	R	I	D
Query Conservation		.	.
Alig confidence		.	.																																																	.																						.
Template Conservation																																																				.																						.
Template Sequence		A	A	A	A	R	G	A	Q	L	V	L	V	P	T	A	L	A	G	D	E	T	S	V	P	G	I	L	L	P	A	R	A	V	E	N	G	I	T	L	A	Y	A	N	H	C	G	P	E	G	G	.	L	V	F	D	G	G	S	V	V	V	G	P	A	G	Q	P	L	G	E	L	G	.	V	E	P	G	L	L	V
Template Known Secondary structure						T	T		S									B	S			T					T										T								B					T	T	.												T	T	S								.	S	S
Template Predicted Secondary structure																																																				.																						.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	S	M	A	A	L	R	E	Y	R	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	L	P	D	D	Y	L	Q	D	R	R	A	E
Template Known Secondary structure												S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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