Job Description Q47679 Confidence 100.00% Date Thu Jan 5 12:36:58 GMT 2012 Rank 10 Aligned Residues 248 % Identity 17% Template c3dlaD_ PDB info PDB header:ligase Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don Resolution 2.35 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.																											.	.	.	.
Query SS confidence																															.	.																											.	.	.	.
Query Sequence		L	K	I	T	L	L	Q	Q	P	L	V	W	M	D	G	P	A	N	L	R	H	F	D	R	Q	L	E	G	I	.	.	T	G	R	D	V	I	V	L	P	E	M	F	T	S	G	F	A	M	E	A	A	A	S	S	L	A	.	.	.	.	Q	D	D	V	V	N	W	M	T	A	K	A	Q	Q	C	N	A	L	I
Query Conservation																															.	.																											.	.	.	.
Alig confidence																															.	.																											.	.	.	.
Template Conservation
Template Sequence		V	R	V	A	A	C	T	H	H	T	T	I	G	D	P	A	A	N	A	A	S	V	L	D	M	A	R	A	C	H	D	D	G	A	A	L	A	V	F	P	E	L	T	L	S	G	Y	S	I	E	D	V	L	L	Q	D	S	L	L	D	A	V	E	D	A	L	L	D	L	V	T	E	S	A	D	L	L	P	V	L
Template Known Secondary structure													T	T																			T	T		S						T	T	T	T	T		T	T		G	G	G	G	G																			G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																				.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	S	V	A	L	Q	T	E	S	G	S	V	N	R	F	L	L	V	E	P	G	G	T	V	H	F	Y	D	K	R	H	L	.	.	F	R	M	A	D	E	H	L	H	Y	K	A	G	N	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	V	E	W	R	G	W	R	I
Query Conservation																																			.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	G	A	P	L	R	H	R	H	R	I	Y	N	T	A	V	V	I	H	R	G	A	V	L	G	V	V	P	K	S	Y	L	P	T	Y	R	E	F	Y	E	R	R	Q	M	A	P	G	D	G	E	R	G	T	I	R	I	G	G	A	D	V	A	F	G	T	D	L	L	F	A	A	S	D	L	P	G	F	V	L
Template Known Secondary structure										T	T											T	T									S						T	T								B			T	T			S					T	T						S	S	S						T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		137	.	.	140	.	.	.	.	.	.	.	.		.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure														.				.	.																		.	.
Query SS confidence														.				.	.																		.	.
Query Sequence		L	P	L	V	C	Y	D	L	R	F	P	V	.	W	S	R	.	.	N	L	N	D	Y	D	L	A	L	Y	V	A	N	W	P	A	P	.	.	R	S	L	H	W	Q	A	L	L	T	A	R	A	I	E	N	Q	A	Y	V	A	G	C	N	R	V	G	S	D	G	N	G	C	H	Y	R	G	D	S	R	V	I	N
Query Conservation														.				.	.																		.	.
Alig confidence														.				.	.																		.	.
Template Conservation
Template Sequence		H	V	E	I	C	E	D	M	F	V	P	M	P	P	S	A	E	A	A	L	A	G	A	T	V	L	A	N	L	S	G	S	P	I	T	I	G	R	A	E	D	R	R	L	L	A	R	S	A	S	A	R	C	L	A	A	Y	V	Y	A	A	A	G	E	G	E	S	T	T	D	L	A	W	D	G	Q	T	M	I	W
Template Known Secondary structure						G	G	G	G	S	S	S	S										T												B		T	T																T	T	S									T	T	S			S	S		B
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		P	Q	G	E	I	I	A	T	A	D	A	H	Q	A	T	.	.	R	I	D	A	E	L	S	M	A	A	L	R	E	Y	R	E	K	F	P	A	W	Q	D	A	D
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		E	N	G	A	L	L	A	E	S	E	R	F	P	K	G	V	R	R	S	V	A	D	V	D	T	E	L	L	R	S	E	R	L	R	M	G	T	F	D	D	N	R
Template Known Secondary structure			T	T								S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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