Job Description Q47679 Confidence 100.00% Date Thu Jan 5 12:36:58 GMT 2012 Rank 6 Aligned Residues 250 % Identity 22% Template c2w1vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nitrilase homolog 2; PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution Resolution 1.49 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																					.	.
Query SS confidence																																			.	.																					.	.
Query Sequence		M	P	G	L	K	I	T	L	L	Q	Q	P	L	V	W	M	D	G	P	A	N	L	R	H	F	D	R	Q	L	E	G	I	T	.	.	G	R	D	V	I	V	L	P	E	M	F	T	S	G	F	A	M	E	A	A	.	.	A	S	S	L	A	Q	D	D	V	V	N	W	M	T	A	K	A	Q	Q	C	N	A	L
Query Conservation																																			.	.																					.	.
Alig confidence																.																			.	.																					.	.
Template Conservation																.
Template Sequence		M	S	T	F	R	L	A	L	I	Q	L	Q	V	S	.	S	I	K	S	D	N	L	T	R	A	C	S	L	V	R	E	A	A	K	Q	G	A	N	I	V	S	L	P	E	C	F	N	S	P	Y	G	T	T	Y	F	P	D	Y	A	E	K	I	P	G	E	S	T	Q	K	L	S	E	V	A	K	E	S	S	I	Y
Template Known Secondary structure																.	S																			T	T		S						T	T	T	T	S			S	T	T	T						B		S	S	S														T	S
Template Predicted Secondary structure																.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		77		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure			.																										.														.	.	.	.	.	.	.
Query SS confidence			.																										.														.	.	.	.	.	.	.
Query Sequence		I	.	A	G	S	V	A	L	Q	T	E	S	G	S	V	N	R	F	L	L	V	E	P	G	G	T	V	.	H	F	Y	D	K	R	H	L	F	R	M	A	D	.	.	.	.	.	.	.	E	H	L	H	Y	K	A	G	N	A	R	V	I	V	E	W	R	G	W	R	I	L	P	L	V	C	Y	D	L	R	F	P
Query Conservation			.																										.														.	.	.	.	.	.	.
Alig confidence			.																										.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	G	G	S	I	P	E	E	D	A	G	K	L	Y	N	T	C	S	V	F	G	P	D	G	S	L	L	V	K	H	R	K	I	H	L	F	D	I	D	V	P	G	K	I	T	F	Q	E	S	K	T	L	S	P	G	D	S	F	S	T	F	D	T	P	Y	C	K	V	G	L	G	I	C	Y	D	M	R	F	A
Template Known Secondary structure												T	T											T	T	S									S	S							T	T	T					G	G	G	T													S	S								G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		148	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure						.	.																			.
Query SS confidence						.	.																			.
Query Sequence		V	W	S	R	.	.	N	L	N	D	Y	D	L	A	L	Y	V	A	N	W	P	A	P	R	.	S	L	H	W	Q	A	L	L	T	A	R	A	I	E	N	Q	A	Y	V	A	G	C	N	R	V	G	S	D	G	N	G	C	H	Y	R	G	D	S	R	V	I	N	P	Q	G	E	I	I	A	T	A	D	A	H	Q
Query Conservation						.	.																			.
Alig confidence						.	.																			.																																																					.
Template Conservation																																																																															.
Template Sequence		E	L	A	Q	I	Y	A	Q	R	G	C	Q	L	L	V	Y	P	G	A	F	N	L	T	T	G	P	A	H	W	E	L	L	Q	R	A	R	A	V	D	N	Q	V	Y	V	A	T	A	S	P	A	R	D	D	K	A	S	Y	V	A	W	G	H	S	T	V	V	D	P	W	G	Q	V	L	T	K	A	G	.	T	E
Template Known Secondary structure										T	T												T	T																		T												T	T	S	S	S											T	T	S								.	S	S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	R	I	D	A	E	L	S	M	A	A	L	R	E	Y	R	E	K	F	P	A	W	Q	D	A	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	I	L	Y	S	D	I	D	L	K	K	L	A	E	I	R	Q	Q	I	P	I	L	K	Q	K	R	A
Template Known Secondary structure		S																			S		G	G	G	S			T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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