Job Description Q47679 Confidence 100.00% Date Thu Jan 5 12:36:58 GMT 2012 Rank 4 Aligned Residues 245 % Identity 20% Template c2plqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aliphatic amidase; PDBTitle: crystal structure of the amidase from geobacillus pallidus rapc8 Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																					.	.	.	.																	.	.	.	.
Query SS confidence														.	.	.	.																					.	.	.	.																	.	.	.	.
Query Sequence		P	G	L	K	I	T	L	L	Q	Q	P	L	.	.	.	.	V	W	M	D	G	P	A	N	L	R	H	F	D	R	Q	L	E	G	I	T	.	.	.	.	G	R	D	V	I	V	L	P	E	M	F	T	S	G	F	A	.	.	.	.	M	E	A	A	A	S	S	L	A	Q	D	D	V	V	N	W	M	T	A	K
Query Conservation														.	.	.	.																					.	.	.	.																	.	.	.	.
Alig confidence														.	.	.	.																					.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		D	T	V	G	I	A	V	V	N	Y	K	M	P	R	L	H	T	K	A	E	V	I	E	N	A	K	K	I	A	D	M	V	V	G	M	K	Q	G	L	P	G	M	D	L	V	V	F	P	E	Y	S	T	M	G	I	M	Y	D	Q	D	E	M	F	A	T	A	A	S	I	P	G	E	E	T	A	I	F	A	E	A
Template Known Secondary structure		T										B						S																							T	T								T	T	T	T	T					S									B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure														.	.	.	.	.																				.
Query SS confidence														.	.	.	.	.																				.
Query Sequence		A	Q	Q	C	N	A	L	I	A	G	S	V	.	.	.	.	.	A	L	Q	T	E	S	G	S	V	N	R	F	L	L	V	E	P	G	G	.	T	V	H	F	Y	D	K	R	H	L	F	R	M	A	D	E	H	L	H	Y	K	A	G	N	A	R	V	I	V	E	W	R	G	W	R	I	L	P	L	V	C	Y	D
Query Conservation														.	.	.	.	.																				.
Alig confidence														.	.	.	.	.																				.											.	.
Template Conservation																																																	.	.
Template Sequence		C	K	K	A	D	T	W	G	V	F	S	L	T	G	E	K	H	E	D	H	P	N	K	A	P	Y	N	T	L	V	L	I	N	N	K	G	E	I	V	Q	K	Y	R	K	I	I	P	.	.	W	C	P	I	E	G	W	Y	P	G	D	T	T	Y	V	T	E	G	P	K	G	L	K	I	S	L	I	V	C	D	D
Template Known Secondary structure						T													T	T	T	T	S	S											T	T	S									S	S		.	.		T	T	T				B											G	G	G								G	G	G
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		L	R	F	P	V	W	S	R	.	.	N	L	N	D	Y	D	L	A	L	Y	V	A	N	W	P	A	P	R	S	L	H	W	Q	A	L	L	T	A	R	A	I	E	N	Q	A	Y	V	A	G	C	N	R	V	G	S	D	G	N	G	C	H	Y	R	G	D	S	R	V	I	N	P	Q	G	E	I	I	A	T	A	D
Query Conservation										.	.
Alig confidence										.	.																																																	.
Template Conservation																																																												.
Template Sequence		G	N	Y	P	E	I	W	R	D	C	A	M	K	G	A	E	L	I	V	R	C	Q	G	Y	M	Y	P	A	K	E	Q	Q	I	M	M	A	K	A	M	A	W	A	N	N	T	Y	V	A	V	A	N	A	T	G	F	D	G	V	.	Y	S	Y	F	G	H	S	A	I	I	G	F	D	G	R	T	L	G	E	C	G
Template Known Secondary structure		G	G	S										T	T		S									B	T	T																T	T													S	S	.												T	T	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Q	A	T	R	I	D	A	E	L	S	M	A	A	L	R	E	Y	R	E	K	F	P	A	W	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	E	N	G	I	Q	Y	A	E	V	S	I	S	Q	I	R	D	F	R	K	N	A	Q	S	Q	N	H
Template Known Secondary structure		S		T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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