Return to main results Retrieve Phyre Job Id

Job DescriptionQ47679
Confidence5.93%DateThu Jan 5 12:36:58 GMT 2012
Rank80Aligned Residues53
% Identity17%Templatec2j63B_
PDB info PDB header:lyaseChain: B: PDB Molecule:ap-endonuclease; PDBTitle: crystal structure of ap endonuclease lmap from leishmania2 major
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.....
Predicted Secondary structure 
























Query SS confidence 





















































Query Sequence  PGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAAS
Query Conservation     


  
      
   
      

  
 








  
 

       
Alig confidence 































.




















Template Conservation    


 



 
       
   
   
    .



 



            
Template Sequence  RMYKFITWNVAGLRGLLKKNASALRAFMEAEK. PDVLCLQETKLNVDEADANAT
Template Known Secondary structure  T
S

TT
.
S



BTT
T
Template Predicted Secondary structure 










.








Template SS confidence 





















































   128.130.........140.........150......... 160.........170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions