Job Description Q47679 Confidence 19.72% Date Thu Jan 5 12:36:58 GMT 2012 Rank 33 Aligned Residues 144 % Identity 13% Template c2fu3A_ PDB info PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10										.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		P	G	L	K	I	T	L	L	Q	.	.	.	.	.	.	.	.	.	Q	P	L	V	W	M	D	G	P	A	N	L	R	H	F	D	R	Q	L	E	G	I	T	G	R	D	V	I	V	L	P	E	M	F	T	S	G	F	A	M	E	A	A	A	S	S	L	A	Q	D	D	V	V	N	W	M	T	A	K	A	Q	Q
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	F	P	V	V	A	V	M	S	T	G	N	E	L	L	N	P	E	D	D	L	L	P	G	K	I	R	D	S	N	R	S	T	L	L	A	T	I	Q	E	H	G	Y	P	T	I	N	L	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	G	D	N	P	D	D	L	L	N	A	L	N	E	G	I	S	R
Template Known Secondary structure													T	T				T	T	S				T	T																	T	T										.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.													.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		C	N	A	L	I	A	G	S	V	A	L	Q	T	E	S	G	S	V	N	R	F	L	L	V	E	P	G	G	T	V	H	F	Y	.	D	K	R	H	L	F	R	M	A	D	E	H	L	H	Y	K	A	G	N	A	R	V	I	V	E	W	R	G	W	R	I	L	P	L	V	C	Y	D	L	R	F	P	V	W	S	R
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		A	D	V	I	I	T	S	G	G	V	S	M	G	E	K	D	Y	L	K	Q	V	L	D	I	D	L	H	A	Q	I	H	F	G	R	V	F	M	K	P	G	L	P	T	T	F	A	T	L	D	I	D	G	V	R	K	I	I	F	A	L	P	G	N	P	V	S	A	V	V	T	C	N	L	F	V	V	P	A	L	R
Template Known Secondary structure			S						S			S	S	S	S	T										T	T							S			S		B	S		T	T									T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
		152	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	N	D	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	M	Q	G	I	L
Template Known Secondary structure				T	T		S
Template Predicted Secondary structure
Template SS confidence
		645	.	.	.	.	650

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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