Job Description Q47679 Confidence 6.04% Date Thu Jan 5 12:36:58 GMT 2012 Rank 77 Aligned Residues 55 % Identity 18% Template c2exuA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription initiation protein spt4/spt5; PDBTitle: crystal structure of saccharomyces cerevisiae transcription elongation2 factors spt4-spt5ngn domain Resolution 2.23 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.
Predicted Secondary structure																			.	.	.																																			.	.	.
Query SS confidence																			.	.	.																																			.	.	.
Query Sequence		H	Y	R	G	D	S	R	V	I	N	P	Q	G	E	I	I	A	.	.	.	T	A	D	A	H	Q	A	T	R	I	D	A	E	L	S	M	A	A	L	R	E	Y	R	E	K	F	P	A	W	Q	D	A	D	E	.	.	.	F	R	L	W
Query Conservation																			.	.	.																																			.	.	.
Alig confidence																			.	.	.																																			.	.	.
Template Conservation
Template Sequence		S	F	E	G	L	V	G	M	C	K	P	T	K	S	W	V	A	K	W	L	S	V	D	H	S	I	A	G	M	Y	A	I	K	V	D	G	R	L	P	A	E	V	V	E	L	L	P	H	Y	K	P	R	D	G	S	G	S	A	T	I	W
Template Known Secondary structure										S		T	T	T							T	T		T	T	S		S									S								T	T		T	T				T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions