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Job DescriptionQ47679
Confidence100.00%DateThu Jan 5 12:36:58 GMT 2012
Rank5Aligned Residues247
% Identity15%Templatec2e2kC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:formamidase; PDBTitle: helicobacter pylori formamidase amif contains a fine-tuned cysteine-2 glutamate-lysine catalytic triad
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10..... ....20.........30... ......40.........50 .........60.........70.
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Query Sequence  LKITLLQQPLVW. . . . MDGPANLRHFDRQLEGIT. . . . GRDVIVLPEMFTSGFAM. . . . EAAASSLAQDDVVNWMTAKAQ
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Template Sequence  FLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLDVPGKETELYAKACK
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   72.......80..... ....90.........100.. .......110.........120.........130.... .....140......
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Query Sequence  QCNALIAGSVALQT. . . ESGSVNRFLLVEPGGTV. HFYDKRHLFRMADEHLHYKAGNARVIVEWRGW. RILPLVCYDLRF
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Template Sequence  EAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGEIILKYRKLFPWNPIEP. . WYPGDLGMPVCEGPGGSKLAVCISHDGMI
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   94.....100.........110.........120.........130.........140.. .......150.........160.........170.
 
   147..150. ........160.........170.........180.........190.........200.........210.........220....
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Query Sequence  PVWSR. . NLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQ
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Template Sequence  PELAREAAYKGCNVYIRISGYSTQVNDQWILTNRSNAWHNLMYTVSVNLAGYDN. . FYYFGEGQICNFDGTTLVQGHRNP
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   172.......180.........190.........200.........210.........220..... ....230.........240.........
 
   225....230.........240.........250....
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Query Sequence  ATRIDAELSMAALREYREKFPAWQDADEFR
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Template Sequence  WEIVTGEIYPKMADNARLSWGLENNIYNLG
Template Known Secondary structure  T


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   251........260.........270.........280
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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