|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | |
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|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
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. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |
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|
|
| . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
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|
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|
| . |
. |
. |
. |
|
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| . |
. |
. |
. |
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| . |
. |
. |
. |
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Query Sequence |   |
L | K | I | T | L | L | Q | Q | P | L | V | W | . |
. |
. |
. |
M | D | G | P | A | N | L | R | H | F | D | R | Q | L | E | G | I | T | . |
. |
. |
. |
G | R | D | V | I | V | L | P | E | M | F | T | S | G | F | A | M | . |
. |
. |
. |
E | A | A | A | S | S | L | A | Q | D | D | V | V | N | W | M | T | A | K | A | Q |
Query Conservation |   |
  |
|
|
|   |   |
|   |   |   |   |   | . | . | . | . |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   | . | . | . | . |
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|   |   |
|   |
|
|   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
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|
| . | . | . | . |
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| . | . | . | . |
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| . | . | . | . |
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|
Template Conservation |   |
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |
|
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|   |   |
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|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
F | L | V | A | A | I | Q | F | P | V | P | I | V | N | S | R | K | D | I | D | H | N | I | E | S | I | I | R | T | L | H | A | T | K | A | G | Y | P | G | V | E | L | I | I | F | P | E | Y | S | T | Q | G | L | N | T | A | K | W | L | S | E | E | F | L | L | D | V | P | G | K | E | T | E | L | Y | A | K | A | C | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |
|
| T | T | T | T | T |
|
|
| T | T | T | T | T | S | G | G | G |
| B |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
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|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|
|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
. | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
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|
|  |  |  |  |  |  |
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|  | . |  |  |  |  |
|
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|  |  |  |
|
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|
|  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |
|
|
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|
Query SS confidence |   |
|
|
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|
| . |
. |
. |
|
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| . |
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|
| . |
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|
Query Sequence |   |
Q | C | N | A | L | I | A | G | S | V | A | L | Q | T | . |
. |
. |
E | S | G | S | V | N | R | F | L | L | V | E | P | G | G | T | V | . |
H | F | Y | D | K | R | H | L | F | R | M | A | D | E | H | L | H | Y | K | A | G | N | A | R | V | I | V | E | W | R | G | W | . |
R | I | L | P | L | V | C | Y | D | L | R | F |
Query Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |
| . |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   | . |   |
|
|   |   |
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
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|
|
| . |
|
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|
| . | . |
|
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|
|
|
|
|
|
| . |
|
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|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |
|   |
|   |   |   |
|
|
|   |
|
|   |   |   |
|
|   | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |
|
Template Sequence |   |
E | A | K | V | Y | G | V | F | S | I | M | E | R | N | P | D | S | N | K | N | P | Y | N | T | A | I | I | I | D | P | Q | G | E | I | I | L | K | Y | R | K | L | F | P | W | N | P | I | E | P | . |
. |
W | Y | P | G | D | L | G | M | P | V | C | E | G | P | G | G | S | K | L | A | V | C | I | S | H | D | G | M | I |
Template Known Secondary structure |   |
 |  | T |
|  |  |  |  |  |  |  |  |
|
| S | S | T | T | S |
|
|  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |
| S | S |
|
| T | T | T |
|
| . | . |
| B |
|
| S | S |
|
|
|
|  |  |
| G | G | G |
|  |  |  |  |  |  | G | G | G | G | G |
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
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|
Template SS confidence |   |
|
|
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|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | |
|
. | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
  |   |
147 | . | . | 150 | . | |
|
. | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  | . | . |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |
|
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|
|  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |
|
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|
Query SS confidence |   |
|
|
|
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| . |
. |
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Query Sequence |   |
P | V | W | S | R | . |
. |
N | L | N | D | Y | D | L | A | L | Y | V | A | N | W | P | A | P | R | S | L | H | W | Q | A | L | L | T | A | R | A | I | E | N | Q | A | Y | V | A | G | C | N | R | V | G | S | D | G | N | G | C | H | Y | R | G | D | S | R | V | I | N | P | Q | G | E | I | I | A | T | A | D | A | H | Q |
Query Conservation |   |
|
|   |   |   | . | . |   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . |
|
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| . | . |
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|
Template Conservation |   |
|
|   |   |
|   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|
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|
|   |
|
|   |   |
|
|
|   |
|
|   |
|
|   |
|   | . | . |   |   |   |   |
|   |
|   |
|
|   |
|   |
|   |
|
|
|   |
|   |   |   |   |
Template Sequence |   |
P | E | L | A | R | E | A | A | Y | K | G | C | N | V | Y | I | R | I | S | G | Y | S | T | Q | V | N | D | Q | W | I | L | T | N | R | S | N | A | W | H | N | L | M | Y | T | V | S | V | N | L | A | G | Y | D | N | . |
. |
F | Y | Y | F | G | E | G | Q | I | C | N | F | D | G | T | T | L | V | Q | G | H | R | N | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
|
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
| S |
| S |
|
| . | . |
|
|
|
|
|
|
|  |  |  |
| T | T | S |
|  |  |  |  |
|
| S |
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
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|
| . | . |
|  |  |  |
|
|  |  |  |  |
|
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|
|  |  |  |  |
|
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|
Template SS confidence |   |
|
|
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|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
|
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
  |
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
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|
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|
|
|
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|
Query Sequence |   |
A | T | R | I | D | A | E | L | S | M | A | A | L | R | E | Y | R | E | K | F | P | A | W | Q | D | A | D | E | F | R |
Query Conservation |   |
  |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
W | E | I | V | T | G | E | I | Y | P | K | M | A | D | N | A | R | L | S | W | G | L | E | N | N | I | Y | N | L | G |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
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  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
  |