Job Description P43341 Confidence 99.48% Date Thu Jan 5 12:02:20 GMT 2012 Rank 36 Aligned Residues 232 % Identity 13% Template c1oidA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein usha; PDBTitle: 5'-nucleotidase (e. coli) with an engineered disulfide2 bridge (s228c, p513c) Resolution 2.1 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10								.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.	.	.	.	.	.	.																	.	.													.
Query SS confidence												.	.	.	.	.	.	.																	.	.													.
Query Sequence		M	A	T	L	F	I	A	D	L	H	.	.	.	.	.	.	.	L	C	V	E	E	P	A	I	T	A	G	F	L	R	F	L	.	.	A	G	E	A	R	K	A	D	A	L	Y	I	.	L	G	D	L	F	E	A	W	I	G	D	D	D	P	N	P	L	H	R	K	M	A	A	A	I	K	A	V	S	D	S	G
Query Conservation												.	.	.	.	.	.	.																	.	.													.
Alig confidence												.	.	.	.	.	.	.																	.	.													.									.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		I	T	V	L	H	T	N	D	H	H	G	H	F	W	R	N	E	Y	G	E	Y	G	L	A	A	Q	K	T	L	V	D	G	I	R	K	E	V	A	A	E	G	G	S	V	L	L	L	S	G	G	D	I	N	T	G	V	.	.	.	.	.	P	E	S	D	L	Q	D	A	E	P	D	F	R	G	M	N	L	V	G
Template Known Secondary structure											T	T			S			T	T	S																					T	T									S			S	S	S		.	.	.	.	.					T	T	T	T											T
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.																			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	C	Y	F	I	H	G	N	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	L	G	K	R	F	A	R	E	S	G	M	T	L	L	P	E	E	K	V	L	E	L	Y	G	R	R	V	L	I	M	H	G	D	T	L	C	T	D	D	A	G	Y	Q	A	F	R	A	K	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		Y	D	A	M	.	A	I	G	N	H	E	F	D	N	P	L	T	V	L	R	Q	Q	E	K	W	A	K	F	P	L	L	S	A	N	I	Y	Q	K	S	T	G	E	R	L	F	K	P	W	A	L	F	K	R	Q	D	L	K	I	A	V	I	G	L	T	T	D	D	T	A	K	I	G	N	P	E	Y	F	T	D	I
Template Known Secondary structure						.				G	G	G	G	S	S													S	S					S	S				T	T	T			B	S	S									T	T											T	T					S		G	G	G	G	T	T
Template Predicted Secondary structure						.
Template SS confidence
		109	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		133					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																																																																											.
Query SS confidence			.	.	.	.																																																																											.
Query Sequence		H	.	.	.	.	K	P	W	L	Q	T	L	F	L	A	L	P	L	F	V	R	K	R	I	A	A	R	M	R	A	N	S	K	E	A	N	S	S	K	S	L	A	I	M	D	V	N	Q	N	A	V	V	S	A	M	E	K	H	Q	V	Q	W	L	I	H	G	H	T	H	R	P	A	V	H	E	L	I	A	N	.
Query Conservation			.	.	.	.																																																																											.
Alig confidence			.	.	.	.																																							.	.																																			.
Template Conservation																																													.	.
Template Sequence		E	F	R	K	P	A	D	E	A	K	L	V	I	Q	E	L	Q	Q	T	E	K	P	D	I	I	I	A	A	T	H	M	G	H	Y	D	N	G	E	H	G	C	N	A	.	.	P	G	D	V	E	M	A	R	A	L	P	A	G	S	L	A	M	I	V	G	G	H	S	Q	D	P	V	C	M	A	A	E	N	K	K
Template Known Secondary structure																				T	T			S								S				G	G	G			T	T	S		.	.										S		T	T	S	S	S						S	S			B						T	T
Template Predicted Secondary structure																																													.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
																208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	P	A	F	R	V	V	L	G	A	W	H	T	E	G	S	M	V	K	V	T	A	D	D	V	E	L	I	H	F	P	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	D	Y	V	P	G	T	P	C	K	P	D	Q	Q	N	G	I	W	I	V	Q	A	H	E	W	G	K	Y	V	G	R	A	D	F	E	F	R	N	G	E	M	K	M	V	N	Y
Template Known Secondary structure			S	S			T	T	S								T	T						B		S	T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions