36 c1oidA_ Probab=99.48   E-value=4.5e-12  Score=88.72  Aligned_columns=232  Identities=13%

Q ss_pred             CEEEEEEECC-------CCCCCHHHHHHHHHHH--HHHCCCCCEEEE-ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             9599982203-------5898768999999999--972149979999-08754688886321688999999999997479
Q batch____         1 MATLFIADLH-------LCVEEPAITAGFLRFL--AGEARKADALYI-LGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSG   70 (240)
Q Consensus         1 mril~iSDiH-------~~~~~~~~~~~~~~~l--~~~~~~~D~iv~-~GDl~d~~~~~~~~~~~~~~~~~~l~~l~~~~   70 (240)
                      ++|+++||+|       .+.........+++.+  ...+.+++.+++ +||+++..     ....+.+-...+..+.+.+
T Consensus         9 l~il~~sD~H~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~GD~~~gs-----~~~~~~~g~~~~~~ln~~g   83 (525)
T c1oidA_           9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV-----PESDLQDAEPDFRGMNLVG   83 (525)
T ss_dssp             EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSC-----HHHHTTTTHHHHHHHHHHT
T ss_pred             EEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC-----CHHHHCCCHHHHHHHHHCC
T ss_conf             99999828023011577655785668999999999987259989999758777787-----3553128678999997479


Q ss_pred             CCEEEEECCCC------------------CCCCCHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHHC
Q ss_conf             80999924886------------------333200000001100256348636887799951641256652045665330
Q batch____        71 VPCYFIHGNRD------------------FLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKV  132 (240)
Q Consensus        71 ~~v~~i~GNHD------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (240)
                      ..+. ++||||                  +...+.............+...+..+.++.+....................
T Consensus        84 ~d~~-~~GNHefd~g~~~l~~~~~~~~~~~l~aNi~~~~~~~~~~~p~~i~~~~g~ki~iiG~~~~~~~~~~~~~~~~~~  162 (525)
T c1oidA_          84 YDAM-AIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDI  162 (525)
T ss_dssp             CCEE-ECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTCCBSSCCEEEEEETTEEEEEEEEECTTHHHHSCGGGGTTE
T ss_pred             CCEE-EECCCCCCCCHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCE
T ss_conf             9799-945730018999999999872998898222006788654166699996891799999632454433475555881


Q ss_pred             C----HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEECC-
Q ss_conf             9----79999998607500025268877506755676653011016968999999877996999867777410664248-
Q batch____       133 H----KPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIAN-  207 (240)
Q Consensus       133 ~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~GH~H~~~~~~~~~~-  207 (240)
                      .    .+...+....+.......+++++.|.............  .........+...+++++++||+|++........ 
T Consensus       163 ~~~d~~e~~~~~~~~l~~~~~~D~iI~l~H~g~~~~~~~~~~~--~~~~~~~~~~~~~~vD~ii~GH~H~~~~~~~~~~~  240 (525)
T c1oidA_         163 EFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGCNA--PGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKK  240 (525)
T ss_dssp             EECCHHHHHHHHHHHHHHTTCCSEEEEEEESCCCGGGCCTTSC--CCHHHHHHHSCTTSSSEEECCSSCCBCCEEETTEE
T ss_pred             EECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC--CCHHHHHHHCCCCCCEEEEECCCCCEECCCCCCCC
T ss_conf             8827999999999999852898699998317887767664334--20588897324479419986787733113466765


Q ss_pred             --------------CCCEEEEEECCCCCCCCEEEEECCCEEEEECCC
Q ss_conf             --------------882489980774378418999789159997259
Q batch____       208 --------------QQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF  240 (240)
Q Consensus       208 --------------~~~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~  240 (240)
                                    ..+...+..|+|-...+.+.++-+.-+.....+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~vv~ag~~~~~vg~i~l~~~~~~~~~~~~  287 (525)
T c1oidA_         241 QVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNY  287 (525)
T ss_dssp             CSSCCTTSCCCCEEETTEEEECBCSTTSEEEEEEEEEETTEEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCEEEEEE
T ss_conf             55545665335567774289960788259999999998895468763