Return to main results Retrieve Phyre Job Id

Job DescriptionP77489
Confidence100.00%DateThu Jan 5 12:29:50 GMT 2012
Rank12Aligned Residues588
% Identity21%Templated1n62b2
SCOP infoMolybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain
Resolution1.09

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.. .......170.........180.........190.........
Predicted Secondary structure 













.....................














Query SS confidence 





















. . . . . . . . . . . . . . . . . . . . .




































Query Sequence  YSLADEKQAVNQPPEDTPDKNV. . . . . . . . . . . . . . . . . . . . . GDFDGAFTSAAVKIDATYTTPDQSHMAMEPHASMAVW
Query Conservation       
                .....................

   

  
  


         
  


   

  
Alig confidence 





















.....................




































Template Conservation   

 

    

 
                          
  

   


 

 


  
      
  


   

  
Template Sequence  VDPFKAMEPDAPLLREDIKDKMTGAHGARKHHNHIFRWEIGDKEGTDATFAKAEVVSKDMFTYHRVHPSPLETCQCVASM
Template Known Secondary structure 

GGGTTSTT




GGGTT

TT
SSTT

S

B



SS

Template Predicted Secondary structure 




















































Template SS confidence 















































































   147..150.........160.........170.........180.........190.........200.........210.........220......
 
   200 .........210.........220.........230.........240.........250.........260.........270.......
Predicted Secondary structure  ..




























Query SS confidence 
. .












































































Query Sequence  D. . GNKLTLWTSNQMIDWCRTDLAKTLKVPVENVRIISPYIGGGFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIPN
Query Conservation 
..   
 
  


 
   
  

  



   


    





 
         


 
   




   

 
   
Alig confidence 
..












































































Template Conservation 
   
 
 
  


 
   
  

  



   



   





 
         

 

   





  

 
   
Template Sequence  DKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGGGFGNKVGAYSGYVCAVVASIVLGVPVKWVEDRMENLS
Template Known Secondary structure  TTTT

SS


GGG



S

TTTTSS

SS


Template Predicted Secondary structure 





























Template SS confidence 















































































   227..230.........240.........250.........260.........270.........280.........290.........300......
 
   278.280.........290.........300.........310.... .....320.........330.........340....... ..
Predicted Secondary structure 
















.......















.

Query SS confidence 




































. . . . . . .
































.

Query Sequence  NTTHRPATLQHLRIGADQSGKITAISHESWSGNLPGG. . . . . . . TPETAVQQSELLYAGANRHTGLRLATLDLPEGN. AM
Query Conservation      
       
 
   

 
 
         
   .......            
   
         

 
  
.
 
Alig confidence 




































.......
































.

Template Conservation      
         
   

 
 
       
 


                  
 
  

       
 

  
 
 
 
Template Sequence  TTSFARDYHMTTELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAY
Template Known Secondary structure  S



TT



SS





TT
TTTTGGGTTTTB

S


SS

S
S
Template Predicted Secondary structure 






































Template SS confidence 















































































   307..310.........320.........330.........340.........350.........360.........370.........380......
 
   350 .........360.........370.........380......... 390.........400.........410.........420..
Predicted Secondary structure 
.











....














..
Query SS confidence 
.






































. . . .
































. .
Query Sequence  R. APGEAPGLMALEIAIDELAEKAGIDPVEFRILNDTQVDP. . . . ADPTRCFSRRQLIECLRTGADKFGWKQRNATPG. .
Query Conservation 
.
 
  
  

 
  

 

  

 

 
 
  
      ....               
        
        ..
Alig confidence 
.






































....
































..
Template Conservation 


 
 

  

 
  

 

  




 
 
  
    
        
    
      
    
              
Template Sequence  RCSFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFPYMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAK
Template Known Secondary structure  S
TTTT

B

GGG
S
TTS




T
Template Predicted Secondary structure 































Template SS confidence 















































































   387..390.........400.........410.........420.........430.........440.........450.........460......
 
   423......430.........440...... ...450.........460.........470.........480......
Predicted Secondary structure  ....










............













Query SS confidence  . . . .























. . . . . . . . . . . .







































Query Sequence  . . . . QVRDGEWLVGHGVAAGFRNNLLEK. . . . . . . . . . . . SGARVHLEQNGTVTVETDMTDIGTGSYTILAQTAAEMLGV
Query Conservation  ....    
    
 
 
          ............  
 
 
  

 
 
  
  
 


  
   

 
  


Alig confidence  ....























............







































Template Conservation               


 
      
                 
 
 
  

 
 
  
  
 


  
  


 

 


Template Sequence  QEAFKRGETREIMGIGISFFTEIVGAGPSKNCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGI
Template Known Secondary structure  TTS
S

BS


TTT
TT


TTS
S


SSS
T
Template Predicted Secondary structure 










































Template SS confidence 















































































   467..470.........480.........490.........500.........510.........520.........530.........540......
 
   487..490......... 500.........510.........520.........530 .........540......... 550........
Predicted Secondary structure 




.







....




...



Query SS confidence 












.






























. . . .


















. . .








Query Sequence  PLEQVAVHLGDSS. FPVSAGSGGQWGANTSTSGVYAACMKLREMI. . . . ASAVGFDPEQSQFADGKIT. . . NGTRSATLH
Query Conservation    
 
 
   

 . 
   

  
        

  
   
    ....
             

   ...         
Alig confidence 












.






























....


















...








Template Conservation    
 
 
   

   
   

 


 
   
 

  

  
  

   

  
      
    
 
             
Template Sequence  PADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMK
Template Known Secondary structure 
GGG

BTTTS




S
TT
TTTTTS
GGG
SSTT
Template Predicted Secondary structure 



























Template SS confidence 















































































   547..550.........560.........570.........580.........590.........600.........610.........620......
 
   559560.........570... ......580.........590.........600.........610.........620.........630...
Predicted Secondary structure 









.....























Query SS confidence 














. . . . .



























































Query Sequence  EATAGGRLTAEESIE. . . . . FGTLSKEYQQSTFAGHFVEVGVHSATGEVRVRRMLAVCAAGRILNPKTARSQVIGAMTMG
Query Conservation                 ..... 
            
   




  

 
 
     
 
 
 



  
 


 

   
Alig confidence 














.....



























































Template Conservation                                    
  





  

 
 
       
 
 



  
 


 

   
Template Sequence  ELAWASYNSPPPNLEPGLEAVNYYDPPNMTYPFGAYFCIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEA
Template Known Secondary structure  S

TTS
SS


SS
B

TTT


BS
S
Template Predicted Secondary structure 




































Template SS confidence 















































































   627..630.........640.........650.........660.........670.........680.........690.........700......
 
   634.....640.........650.........660.........670.........680.........690.........700.........710
Predicted Secondary structure 













































...
Query SS confidence 












































































. . .
Query Sequence  MGAALMEELAVDDRLGYFVNHDMAGYEVPVHADIPKQEVIFLDDTDPISSPMKAKGVGELGLCGVSAAIANAVYNAT. . .
Query Conservation 

 

 
    
   
        

 


  
 
   
  

       
 






        

 


 

 ...
Alig confidence 













.































.




























...
Template Conservation 

 

 

   
  .
         
 


  
 
   
   
 
  .  
 






       






  
    
Template Sequence  FAVAMGQEIRYDEQ. GNVLGASFMDFFLPTAVETPKWETDYTVTPSP. HHPIGAKGVGESPHVGGVPCFSNAVNDAYAFL
Template Known Secondary structure  T



TT.

S
STTTS



TTTS







T.TSTTSB


TTTT
Template Predicted Secondary structure 





.






















.














Template SS confidence 















































































   707..710.........720 .........730.........740.........750.. .......760.........770.........780....
 
   711........720.........730
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  GIRVRDYPITLDKLLDKLPD
Query Conservation 
 
   

 


 
  

  
Alig confidence 



















Template Conservation 
 
   

 


 
  

  
Template Sequence  NAGHIQMPHDAWRLWKVGEQ
Template Known Secondary structure  T




S


Template Predicted Secondary structure 





Template SS confidence 



















   785....790.........800....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions