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Job DescriptionP77489
Confidence100.00%DateThu Jan 5 12:29:50 GMT 2012
Rank13Aligned Residues595
% Identity22%Templated1ffvb2
SCOP infoMolybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190.........200 .........210.
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Query Sequence  YRRNKGAYSLADEKQAVNQPPEDTPDKNVGDFDGAFTSAAVKIDATYTTPDQSHMAMEPHASMAVWD. . GNKLTLWTSNQ
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Template Sequence  REDLAGKTSGAHGPREHHNHIFTWGAGDKAATDAVFANAPVTVSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQ
Template Known Secondary structure 
GGGTT

TT
SSTT

S

B



SS

TTTT

S
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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   212.......220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  MIDWCRTDLAKTLKVPVENVRIISPYIGGGFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIPNNTTHRPATLQHLRI
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Template Sequence  APHVVRTVVSMLSGIPESKVRIVSPDIGGGFGNKVGIYPGYVCAIVASIVLGRPVKWVEDRVENISTTAFARDYHMDGEL
Template Known Secondary structure 



GGG



S

TTTTSS

TS


S


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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   292.......300.........310... ......320.........330.........340.........350.........360....
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Query Sequence  GADQSGKITAISHESWSGNLPG. . . . . . . GTPETAVQQSELLYAGANRHTGLRLATLDLPEGNAMRAPGEAPGLMALEIA
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Template Sequence  AATPDGKILGLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTNKAPGGVAYSFRVTEAVYLIERM
Template Known Secondary structure 
TT



SS





TT
TTTTGGGTTTTB

S

SS

S



S
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   318.320.........330.........340.........350.........360.........370.........380.........390.......
 
   365....370.........380......... 390.........400.........410.........420..... ....430.......
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Query Sequence  IDELAEKAGIDPVEFRILNDTQVDP. . . . ADPTRCFSRRQLIECLRTGADKFGWKQRNATPGQVR. . . DGEWLVGHGVAA
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Template Sequence  VDVLAQKLNMDKAEIRAKNFIRKEQFPYTTQFGFEYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVT
Template Known Secondary structure  T

TTB

GGG
S
TTS




T
TT
S
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   400.........410.........420.........430.........440.........450.........460.........470.........
 
   438.440.... .....450.........460.........470.........480.........490......... 500....
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Query Sequence  GFRNNLL. . . . . . . . . . . . EKSGARVHLEQNGTVTVETDMTDIGTGSYTILAQTAAEMLGVPLEQVAVHLGDSS. FPVSA
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Template Sequence  FTEVVGAGPSKMCDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGL
Template Known Secondary structure 

B



TTT
TTS

TTS
S


SSS
T

GGG

BTTTS



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   480.........490.........500.........510.........520.........530.........540.........550.........
 
   505....510.........520.........530 .........540......... 550.........560.........570.....
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Query Sequence  GSGGQWGANTSTSGVYAACMKLREMI. . . . ASAVGFDPEQSQFADGKIT. . . NGTRSATLHEATAGGRLTAEESIEFG. .
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Template Sequence  GTYGSRSTPVAGAAIALAARKIHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEPGLE
Template Known Secondary structure 
S
TT
TTS
GGG
SSSS
TT



TT

SS
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   560.........570.........580.........590.........600.........610.........620.........630.........
 
   576...580.........590.........600.........610.........620.........630.........640.........650..
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Query Sequence  . . . TLSKEYQQSTFAGHFVEVGVHSATGEVRVRRMLAVCAAGRILNPKTARSQVIGAMTMGMGAALMEELAVDDRLGYFV
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Template Sequence  AVHYYDPPNFTYPFGIYLCVVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFDAQ. GNLL
Template Known Secondary structure 

SS
B

TTT


BS
S
T



B
TT.

B
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   640.........650.........660.........670.........680.........690.........700.........710.... ....
 
   653......660.........670.........680.........690.........700......... 710.........720.........
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Query Sequence  NHDMAGYEVPVHADIPKQEVIFLDDTDPISSPMKAKGVGELGLCGVSAAIANAVYNA. . . TGIRVRDYPITLDKLLDKLP
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Template Sequence  GNTLMDYFLPTAVETPHWETDHTVTPSP. HHPIGAKGVAESPHVGSIPTFTAAVVDAFAHVGVTHLDMPHTSYRVWKSLK
Template Known Secondary structure  S
STTTS



TTTS







T.TSTT
B


TTGGGT




S


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   719720.........730.........740...... ...750.........760.........770.........780.........790.......
 
   730
Predicted Secondary structure 
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Query Sequence  D
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  E
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   798
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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