 |
Job Description | P77489 | Confidence | 100.00% | Date | Thu Jan 5 12:29:50 GMT 2012 |
Rank | 23 | Aligned Residues | 131 |
% Identity | 25% | Template | d1ffvb1 |
SCOP info | alpha/beta-Hammerhead
| CO dehydrogenase molybdoprotein N-domain-like
| CO dehydrogenase molybdoprotein N-domain-like
|
Resolution | 2.25 |
|
 |
  |   |
11 | . | . | . | . | . | . | |
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | I | D | Q | L | K | V | . |
. |
V | G | R | P | H | D | R | I | D | G | P | L | K | T | T | G | T | A | R | Y | A | Y | E | W | H | E | E | A | P | N | A | A | Y | G | Y | I | V | G | S | A | I | A | K | G | R | L | T | A | L | D | T | D | A | A | Q | K | A | P | G | V | L | A | V | I | T | A | S | N | A | G | A |
Query Conservation |   |
|   |   |   |   |   |   | . | . |
|
|   |   |   |   |
|   |
|   |   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |
|
|
|
|   |   |   |
|
|
|
|
|   |
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |
|
|
|   |
|
|
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |
|   |   |   |
|
|
|
|   |
|   |
|   |   |
|
| . | . |   |   |   |
|   |
|   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |
|
|   |
|   |
|   |   |   |
|
|
|
|   |
|   |
|   |   |
|   |
|   |
Template Sequence |   |
E | A | R | E | L | A | L | A | G | M | G | A | S | R | L | R | K | E | D | A | R | F | I | Q | G | K | G | N | Y | V | D | D | I | . |
. |
K | M | P | G | M | L | H | M | D | I | V | R | A | P | I | A | H | G | R | I | K | K | I | H | K | D | A | A | L | A | M | P | G | V | H | A | V | L | T | A | E | D | L | K | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
| T | T |
|
|
|
|
| S | S |  |  |  |  | T | T | T |
|
|
|
| G | G | G |
| . | . |
|
| T | T |
|
|  |  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  |
|  |  |  |  |  | S | T | T |  |  |  |  |  |
|  |  |  |  | G | G |
Template Predicted Secondary structure |   |
|  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
89 | 90 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | K | G | D | . |
. |
. |
. |
. |
K | N | T | A | R | L | L | G | G | P | T | I | E | H | Y | H | Q | A | I | A | L | V | V | A | E | T | F | E | Q | A | R | A | A | A | S | L | V | Q | A | H | Y | R | R | N | K | G | A | Y | S | L |
Query Conservation |   |
  |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|
|   |
|
|   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|   |
|
|   |
|   |
|
|
Template Sequence |   |
L | K | L | H | W | M | P | T | L | A | G | D | V | A | A | V | L | A | D | E | K | V | H | F | Q | M | Q | E | V | A | I | V | I | A | D | D | R | Y | I | A | A | D | A | V | E | A | V | K | V | E | Y | D | E | L | P | V | V | I | D | P |
Template Known Secondary structure |   |
G | T |
| S |  |  |  |
| T | T | S |
|  |  |  | S | S |
|
| S |  |  |
| S | T | T |
|  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|