Return to main results Retrieve Phyre Job Id

Job DescriptionP77489
Confidence100.00%DateThu Jan 5 12:29:50 GMT 2012
Rank17Aligned Residues569
% Identity25%Templated1dgja4
SCOP infoMolybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.. .......170. ........180.........190.........200 .........210
Predicted Secondary structure 













.......

..












.



Query SS confidence 





















. . . . . . .








. .




























.









Query Sequence  YSLADEKQAVNQPPEDTPDKNV. . . . . . . GDFDGAFTS. . AAVKIDATYTTPDQSHMAMEPHASMAVWD. GNKLTLWTSN
Query Conservation       
                .......

   

  ..
  


         
  


   

  
.   
 
  

Alig confidence 





















.......








..




























.









Template Conservation 
   


  


 

    

        

   
     
  


  
      
  


   

     
 
 
   
Template Sequence  MSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVVAEGSYYTQRQPHLPIEPDVGYGYINEQGQVVIHSKS
Template Known Secondary structure 

STT


SBTTB
SSS
SS
TTS






SS


TTS


Template Predicted Secondary structure 






































Template SS confidence 















































































   311........320.........330.........340.........350.........360.........370.........380.........390
 
   211........220.........230 .........240.........250.........260.........270.........280.........
Predicted Secondary structure 




.

























Query SS confidence 



















.


























































Query Sequence  QMIDWCRTDLAKTLKVPVEN. VRIISPYIGGGFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIPNNTTHRPATLQHL
Query Conservation 
 
   
  

  



   .


    





 
         


 
   




   

 
       
       
Alig confidence 



















.




















.




































Template Conservation 
 
      

  


     
 
    


 

 
      .  

 

   




    
 
       
       
Template Sequence  VAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPTME. ALVGVAVMATGRPCHLRYNYEQQQNYTGKRSPFWTTM
Template Known Secondary structure  S
T

TTTT


S

TTGGGS
SS.
S


SS
B


Template Predicted Secondary structure 























.








Template SS confidence 















































































   391........400.........410.........420.........430.. .......440.........450.........460.........
 
   290.........300.........310.... .....320.........330.........340.........350.........360....
Predicted Secondary structure 










.....





















Query SS confidence 
























. . . . .

















































Query Sequence  RIGADQSGKITAISHESWSGNLPGG. . . . . TPETAVQQSELLYAGANRHTGLRLATLDLPEGNAMRAPGEAPGLMALEIA
Query Conservation 
 
   

 
 
         
   .....            
   
         

 
  

 

 
  
  

 
  
Alig confidence 
























.....

















































Template Conservation        

 
 
       
 


                
 
 
 
       
 

  
 

 

 
 

  

 
  
Template Sequence  RYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSEVL
Template Known Secondary structure 
TTS


S

TTTTTTB

S

SS

B


TTTT
Template Predicted Secondary structure 


































Template SS confidence 















































































   470.........480.........490.........500.........510.........520.........530.........540.........
 
   365....370.........380.........390.... .....400.........410.........420.........430.........440.
Predicted Secondary structure 













.















..
Query SS confidence 





























.














































. .
Query Sequence  IDELAEKAGIDPVEFRILNDTQVDPADPTR. CFSRRQLIECLRTGADKFGWKQRNATPGQVRDGEWLVGHGVAAGFRN. .
Query Conservation 

 

  

 

 
 
  
           .          
        
            
    
 
 
     ..
Alig confidence 





























.
























..



















..
Template Conservation 

 

  

 

 
 
 

    
     
           
              ..         



 
      
Template Sequence  MDELAEKLGMDPFELRALNCYREGDTTSSGQIPEVMSLPEMFDKMRPYYEESKKRV. . KERSTAEIKRGVGVALGVYGAG
Template Known Secondary structure  T

B

TT


TTS


S


..TT

SSS
Template Predicted Secondary structure 




























..










Template SS confidence 















































































   550.........560.........570.........580.........590.........600..... ....610.........620.......
 
   442.......450.........460.........470.........480... ......490......... 500.........510......
Predicted Secondary structure  .
















...






.







Query SS confidence  .









































. . .















.
















Query Sequence  . NLLEKSGARVHLEQNGTVTVETDMTDIGTGSYTILAQTAAEM. . . LGVPLEQVAVHLGDSS. FPVSAGSGGQWGANTST
Query Conservation  .       
 
 
  

 
 
  
  
 


  
   

 
  ...


  
 
 
   

 . 
   

  
       
Alig confidence  .









































...















.
















Template Conservation          
 
 
  

 
 
  
    


  
   




    



   
 
   

   
   

  

 
   
Template Sequence  LDGPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQVVTG
Template Known Secondary structure  SSSS

TTS




SSS
TGGGT

GGGSBTTTS




S
TT
TTT
Template Predicted Secondary structure 































Template SS confidence 















































































   628.630.........640.........650.........660.........670.........680.........690.........700.......
 
   517..520.........530..... ....540.........550.........560.........570.........580.........590....
Predicted Secondary structure 
..






























Query SS confidence 


















. .


























































Query Sequence  SGVYAACMKLREMIASAVG. . FDPEQSQFADGKITNGTRSATLHEATAGGRLTAEESIEFGTLSKEYQQSTFAGHFVEVG
Query Conservation   

  
   
    
    ..         

                            
            
   


Alig confidence 


















..

















...........





























Template Conservation   

  

  
   
   

                    ...........                       
  



Template Sequence  NAIRVACEMLIEGMRKPGGGFFTPAEMKAEGRPMRYDGK. . . . . . . . . . . WTAPAKDCDAKGQGSPFACYMYGLFLTEVA
Template Known Secondary structure  TB
SSSSB

TT


...........
S
B


TTS
SB

S
Template Predicted Secondary structure 







...........
















Template SS confidence 















































































   708.710.........720.........730.........740...... ...750.........760.........770......
 
   595....600.........610.........620.........630.........640.........650.........660........ .670...
Predicted Secondary structure 

































.
Query SS confidence 









































































.




Query Sequence  VHSATGEVRVRRMLAVCAAGRILNPKTARSQVIGAMTMGMGAALMEELAVDDRLGYFVNHDMAGYEVPVHADIP. KQEVI
Query Conservation 

  

 
 
     
 
 
 



  
 


 

   


 

 
    
   
        

 


  
 
.   
 
Alig confidence 















































.....




















.




Template Conservation 

  

 
 
     
 
 
 



  
 


 

   


 

 

 ..... 
         
 

   
 
  
 
 
Template Sequence  VEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDY. . . . . EDLKKHSTMGGAGIPSIKMIPDDIEIV
Template Known Secondary structure  TTTT
BS
S
T


.....
STTTTSSTTTTT


GGGS
S
Template Predicted Secondary structure 












.....
















Template SS confidence 















































































   777..780.........790.........800.........810.........820.... .....830.........840.........850.
 
   674.....680.........690.........700.........710.........720.........
Predicted Secondary structure 




























Query SS confidence 























































Query Sequence  FLDDTDPISSPMKAKGVGELGLCGVSAAIANAVYNATGIRVRDYPITLDKLLDKLP
Query Conservation   

       
 






        

 


 

 
 
   

 


 
  

 
Alig confidence 






.















































Template Conservation    
 
  .  
 



 

       


 


  
 
 
   

 


 

 

 
Template Sequence  YVETPRK. DGPFGASGVGEMPLTAPHAAIINGIYNACGARVRHLPARPEKVLEAMP
Template Known Secondary structure 




T.TSGGGB


TTGGGSSS



BS


T

Template Predicted Secondary structure 




.





















Template SS confidence 























































   852...... .860.........870.........880.........890.........900......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions