Job Description P77489 Confidence 100.00% Date Thu Jan 5 12:29:50 GMT 2012 Rank 3 Aligned Residues 711 % Identity 25% Template c2w54F_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:xanthine dehydrogenase; PDBTitle: crystal structure of xanthine dehydrogenase from2 rhodobacter capsulatus in complex with bound inhibitor3 pterin-6-aldehyde Resolution 3.30 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																.																																																	.
Query SS confidence																																.																																																	.
Query Sequence		V	V	G	R	P	H	D	R	I	D	G	P	L	K	T	T	G	T	A	R	Y	A	Y	E	W	H	E	E	A	P	.	N	A	A	Y	G	Y	I	V	G	S	A	I	A	K	G	R	L	T	A	L	D	T	D	A	A	Q	K	A	P	G	V	L	A	V	I	T	A	S	N	A	G	A	L	G	K	G	D	K	.
Query Conservation																																.																																																	.
Alig confidence																											.	.				.																																																	.
Template Conservation																											.	.
Template Sequence		S	V	G	K	P	L	P	H	D	S	A	R	A	H	V	T	G	Q	A	R	Y	L	D	D	L	.	.	P	C	P	A	N	T	L	H	L	A	F	G	L	S	T	E	A	S	A	A	I	T	G	L	D	L	E	P	V	R	E	S	P	G	V	I	A	V	F	T	A	A	D	L	P	H	D	N	D	A	S	P	A
Template Known Secondary structure			T	T						T	T							T					G	G	G	S	.	.				T	T												S	S														S	T	T							G	G	G		S	S						S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
			95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	T	A	R	L	L	G	G	P	T	I	E	H	Y	H	Q	A	I	A	L	V	V	A	E	T	F	E	Q	A	R	A	A	A	S	L	V	Q	A	H	Y	R	R	N	K	G	A	Y	S	L	A	D	E	K	Q	A	V	N	Q	P	P	E	D	T	P	D	K	N	V	G	D	F	D	G	A	F	T	S	A	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		P	S	P	E	P	V	L	A	T	G	E	V	H	F	V	G	Q	P	I	F	L	V	A	A	T	S	H	R	A	A	R	I	A	A	R	K	A	R	I	T	Y	A	P	R	P	A	I	L	T	L	D	Q	A	L	A	A	D	S	R	F	E	G	G	P	V	I	W	A	R	G	D	V	E	T	A	L	A	G	A	A
Template Known Secondary structure		S	S				S	S			S				S	T	T									S	S									T	T													S								T		B	S	T	T	S							S								T		S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		V	K	I	D	A	T	Y	T	T	P	D	Q	S	H	M	A	M	E	P	H	A	S	M	A	V	W	D	G	N	K	L	T	L	W	T	S	N	Q	M	I	D	W	C	R	T	D	L	A	K	T	L	K	V	P	V	E	N	V	R	I	I	S	P	Y	I	G	G	G	F	G	G	K	L	F	L	R	S	D	.	A
Query Conservation																																																																																.
Alig confidence																																																																																.
Template Conservation
Template Sequence		H	L	A	E	G	C	F	E	I	G	G	Q	E	H	F	Y	L	E	G	Q	A	A	L	A	L	P	A	E	G	G	V	V	I	H	C	S	S	Q	H	P	S	E	I	Q	H	K	V	A	H	A	L	G	L	A	F	H	D	V	R	V	E	M	R	R	M	G	G	G	F	G	G	K	E	S	Q	G	N	H	L	A
Template Known Secondary structure													B					S	S										T	T									S														T			G	G	G							B		S			T	T	T	T	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.						.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		L	L	A	A	L	A	A	R	A	V	K	R	P	V	K	V	M	L	P	R	P	S	I	P	N	N	T	T	H	R	P	A	T	L	Q	H	L	R	I	G	A	D	Q	S	G	K	I	T	A	I	S	H	E	S	W	S	G	N	L	P	G	G	.	.	.	.	.	T	P	E	T	A	V	Q	Q	S	E	L	L	Y
Query Conservation																																																																.	.	.	.	.
Alig confidence																																																																.	.	.	.	.
Template Conservation
Template Sequence		I	A	C	A	V	A	A	R	A	T	G	R	P	C	K	M	R	Y	D	R	D	D	D	M	V	I	T	G	K	R	H	D	F	R	I	R	Y	R	I	G	A	D	A	S	G	K	L	L	G	A	D	F	V	H	L	A	R	C	G	W	S	A	D	L	S	L	P	V	C	D	R	A	M	L	H	A	D	G	S	Y
Template Known Secondary structure												S	S															S			B													S	S	S															S	S		T	T											T	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.						390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		A	G	A	N	R	H	T	G	L	R	L	A	T	L	D	L	P	E	G	N	A	M	R	A	P	G	E	A	P	G	L	M	A	L	E	I	A	I	D	E	L	A	E	K	A	G	I	D	P	V	E	F	R	I	L	N	D	T	Q	V	D	P	.	.	.	.	.	A	D	P	T	R	C	F	S	R	R	Q	L	I
Query Conservation																																																																.	.	.	.	.
Alig confidence																																																																.	.	.	.	.
Template Conservation
Template Sequence		F	V	P	A	L	R	I	E	S	H	R	L	R	T	N	T	Q	S	N	T	A	F	R	G	F	G	G	P	Q	G	A	L	G	M	E	R	A	I	E	H	L	A	R	G	M	G	R	D	P	A	E	L	R	A	L	N	F	Y	D	P	P	E	K	K	T	Q	T	T	H	Y	G	Q	E	V	A	D	C	V	L	G
Template Known Secondary structure				S	S											S	S							T	T	T	T																			T	T									T	T	B					.					B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.								.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		E	C	L	R	T	G	A	D	K	F	G	W	K	Q	R	N	A	T	P	G	Q	V	R	D	G	E	W	L	V	G	H	G	V	A	A	G	F	R	N	N	L	.	.	.	.	.	.	.	L	E	K	S	G	A	R	V	H	L	E	Q	N	G	T	V	T	V	E	T	D	M	T	D	I	G	T	G	S	Y	T	I
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	V	T	R	L	Q	K	S	A	N	F	T	T	R	R	A	E	I	A	A	W	N	S	T	N	R	T	L	A	R	G	I	A	L	S	P	V	K	F	G	I	S	F	T	L	T	H	L	N	Q	A	G	A	L	V	Q	I	Y	T	D	G	S	V	A	L	N	H	G	G	T	E	M	G	Q	G	L	H	A	K
Template Known Secondary structure												T																S	S															S		S	S	G	G	G											T	T	S							S			B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530					.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																										.																																.	.	.	.
Query SS confidence																										.																																.	.	.	.
Query Sequence		L	A	Q	T	A	A	E	M	L	G	V	P	L	E	Q	V	A	V	H	L	G	D	S	S	.	F	P	V	S	A	G	S	G	G	Q	W	G	A	N	T	S	T	S	G	V	Y	A	A	C	M	K	L	R	E	M	I	.	.	.	.	A	S	A	V	G	F	D	P	E	Q	S	Q	F	A	D	G	K	I	T	N
Query Conservation																										.																																.	.	.	.
Alig confidence																										.																																.	.	.	.
Template Conservation
Template Sequence		M	V	Q	V	A	A	A	V	L	G	I	D	P	V	Q	V	R	I	T	A	T	D	T	S	K	V	P	N	T	S	A	T	A	A	S	S	G	A	D	M	N	G	M	A	V	K	D	A	C	E	T	L	R	G	R	L	A	G	F	V	A	A	R	E	G	C	A	A	R	D	V	I	F	D	A	G	Q	V	Q	A
Template Known Secondary structure											T	S		G	G	G								T	T	T	S		S				S		T	T																													T	T	S		G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.														580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	R	S	A	T	L	H	E	A	T	A	G	G	R	L	T	A	E	E	S	I	E	F	G	T	L	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	Q	Q	S	T	F	A	G	H	F	V	E	V	G	V	H	S	A	T	G	E	V	R	V	R	R	M	L	A	V	C	A	A	G	R	I	L
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	K	S	W	R	F	A	E	I	V	A	A	A	Y	M	A	R	I	S	L	S	A	T	G	F	Y	A	T	P	K	L	S	W	D	R	L	R	G	Q	G	R	P	F	L	Y	F	A	Y	G	A	A	I	T	E	V	V	I	D	R	L	T	G	E	N	R	I	L	R	T	D	I	L	H	D	A	G	A	S	L
Template Known Secondary structure		T	T															T	T													S					T	T	T	T						S															T	T	T															B	S		S
Template Predicted Secondary structure
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670		.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		N	P	K	T	A	R	S	Q	V	I	G	A	M	T	M	G	M	G	A	A	L	M	E	E	L	A	V	D	D	R	L	G	Y	F	V	N	H	D	M	A	G	Y	E	V	P	V	H	A	D	I	P	K	Q	.	E	V	I	F	L	D	D	T	D	P	I	S	S	P	M	K	A	K	G	V	G	E	L	G	L	C
Query Conservation																																																							.
Alig confidence																																.																							.
Template Conservation																																.
Template Sequence		N	P	A	L	D	I	G	Q	I	E	G	A	Y	V	Q	G	A	G	W	L	T	T	E	E	L	V	W	D	H	C	.	G	R	L	M	T	H	A	P	S	T	Y	K	I	P	A	F	S	D	R	P	R	I	F	N	V	A	L	W	D	Q	P	N	R	E	E	T	I	F	R	S	K	A	V	G	E	P	P	F	L
Template Known Secondary structure																					T	T	T					B		T	T	.	S		B	S			S	T	T	T	S					G	G	G	S		S												S	S			G	G	G	B				S	S	G	G	G	G
Template Predicted Secondary structure																																.
Template SS confidence
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.		.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
		697	.	.	700	.	.	.			.	.	.	.	.	.	710	.	.	.	.	.	.	.			.	.	720	.	.	.	.	.	.	.	.	.	730
Predicted Secondary structure									.	.															.	.
Query SS confidence									.	.															.	.
Query Sequence		G	V	S	A	A	I	A	.	.	N	A	V	Y	N	A	T	G	I	R	V	R	D	Y	.	.	P	I	T	L	D	K	L	L	D	K	L	P	D
Query Conservation									.	.															.	.
Alig confidence									.	.															.	.
Template Conservation
Template Sequence		L	G	I	S	A	F	L	A	L	H	D	A	C	A	A	C	G	P	H	W	P	D	L	Q	A	P	A	T	P	E	A	V	L	A	A	V	R	R
Template Known Secondary structure		G	G													T	T		S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.