Job Description P77489 Confidence 100.00% Date Thu Jan 5 12:29:50 GMT 2012 Rank 6 Aligned Residues 707 % Identity 24% Template c1wygA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s) Resolution 2.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		F	D	K	P	A	G	E	N	P	I	D	Q	L	K	V	V	G	R	P	H	D	R	I	D	G	P	L	K	T	T	G	T	A	R	Y	A	Y	E	W	.	H	E	E	A	P	N	A	A	Y	G	Y	I	V	G	S	A	I	A	K	G	R	L	T	A	L	D	T	D	A	A	Q	K	A	P	G	V	L	A	V	I
Query Conservation																																									.
Alig confidence													.	.																											.		.	.
Template Conservation													.	.																													.	.
Template Sequence		F	Q	E	V	P	K	D	Q	S	E	E	.	.	D	M	V	G	R	P	L	P	H	L	A	A	N	M	Q	A	S	G	E	A	V	Y	C	D	D	I	P	R	.	.	Y	E	N	E	L	S	L	R	L	V	T	S	T	R	A	H	A	K	I	T	S	I	D	T	S	E	A	K	K	V	P	G	F	V	C	F	L
Template Known Secondary structure							S	S	S		T	T	.	.			T	T	S					T	T							T		S			G	G	G	S			.	.		S	S										S	S	S	S									T	T	G	G	G	S	T	T
Template Predicted Secondary structure													.	.																													.	.
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570			.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.			.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		T	A	S	N	A	G	A	L	G	K	G	D	K	.	N	T	A	R	L	L	G	G	P	T	I	E	H	Y	H	Q	A	I	A	L	V	V	A	E	T	F	E	Q	A	R	A	A	A	S	L	V	Q	A	H	Y	R	R	N	K	G	A	Y	S	L	A	D	E	K	Q	A	V	N	Q	P	P	E	D	T	P	D	K
Query Conservation															.
Alig confidence															.																																																								.
Template Conservation																																																																							.
Template Sequence		T	A	E	D	V	P	N	S	N	A	T	G	L	F	N	D	E	T	V	F	A	K	D	E	V	T	C	V	G	H	I	I	G	A	V	V	A	D	T	P	E	H	A	Q	R	A	A	R	G	V	K	I	T	Y	E	D	L	P	A	I	I	T	I	Q	D	A	I	N	N	.	N	S	F	Y	G	S	E	I	K	I
Template Known Secondary structure			S	T	T		S	S					S	T	T	S				S	S			S				S	T	T									S	S									T	T													S								.	T		B	S	S	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.		.	.	.	.	.	710	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		N	V	G	D	F	D	G	A	F	T	S	A	A	V	K	I	D	A	T	Y	T	T	P	D	Q	S	H	M	A	M	E	P	H	A	S	M	A	V	W	D	.	.	G	N	K	L	T	L	W	T	S	N	Q	M	I	D	W	C	R	T	D	L	A	K	T	L	K	V	P	V	E	N	V	R	I	I	S	P	Y	I
Query Conservation																																										.	.
Alig confidence																																										.	.
Template Conservation
Template Sequence		E	K	G	D	L	K	K	G	F	S	E	A	D	N	V	V	S	G	E	L	Y	I	G	G	Q	E	H	F	Y	L	E	T	N	C	T	I	A	V	P	K	G	E	A	G	E	M	E	L	F	V	S	T	Q	N	T	M	K	T	Q	S	F	V	A	K	M	L	G	V	P	D	N	R	I	V	V	R	V	K	R	M
Template Known Secondary structure				S								T		S												B					S	S										S	S	T	T									S														T			G	G	G						S
Template Predicted Secondary structure
Template SS confidence
		715	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure													.																																																																	.	.	.	.
Query SS confidence													.																																																																	.	.	.	.
Query Sequence		G	G	G	F	G	G	K	L	F	L	R	.	S	D	A	L	L	A	A	L	A	A	R	A	V	K	R	P	V	K	V	M	L	P	R	P	S	I	P	N	N	T	T	H	R	P	A	T	L	Q	H	L	R	I	G	A	D	Q	S	G	K	I	T	A	I	S	H	E	S	W	S	G	N	L	P	G	.	.	.	.
Query Conservation													.																																																																	.	.	.	.
Alig confidence													.																																																																	.	.	.	.
Template Conservation
Template Sequence		G	G	G	F	G	G	K	E	T	R	S	T	V	V	S	T	A	L	A	L	A	A	H	K	T	G	R	P	V	R	C	M	L	D	R	D	E	D	M	L	I	T	G	G	R	H	P	F	L	A	K	Y	K	V	G	F	M	K	T	G	T	V	V	A	L	E	V	A	H	F	S	N	G	G	N	T	E	D	L	S
Template Known Secondary structure		S			T	T	T	T	S	S	S	T															S	S																		B													T	T	S															S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		795	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.
			314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	T	P	E	T	A	V	Q	Q	S	E	L	L	Y	A	G	A	N	R	H	T	G	L	R	L	A	T	L	D	L	P	E	G	N	A	M	R	A	P	G	E	A	P	G	L	M	A	L	E	I	A	I	D	E	L	A	E	K	A	G	I	D	P	V	E	F	R	I	L	N	D	T	Q	V	D	P	A	D	P
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		R	S	I	M	E	R	A	L	F	H	M	D	N	A	Y	K	I	P	N	I	R	G	T	G	R	I	C	K	T	N	L	P	S	N	T	A	F	R	G	F	G	G	P	Q	G	M	L	I	A	E	Y	W	M	S	E	V	A	I	T	C	G	L	P	A	E	E	V	R	R	K	N	M	Y	K	E	G	D	L	T	H
Template Known Secondary structure										T	T	T	T	T	T	B			S	S											S	S							T	T	T	T																				T	S										B			T	T		B		T
Template Predicted Secondary structure
Template SS confidence
		875	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.
		393	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.								.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure				.																																											.	.	.	.	.	.	.
Query SS confidence				.																																											.	.	.	.	.	.	.
Query Sequence		T	R	.	C	F	S	R	R	Q	L	I	E	C	L	R	T	G	A	D	K	F	G	W	K	Q	R	N	A	T	P	G	Q	V	R	D	G	E	W	L	V	G	H	G	V	A	.	.	.	.	.	.	.	A	G	F	R	N	N	L	L	E	K	S	G	A	R	V	H	L	E	Q	N	G	T	V	T	V	E	T	D
Query Conservation				.																																											.	.	.	.	.	.	.
Alig confidence				.																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	N	Q	K	L	E	G	F	T	L	P	R	C	W	D	E	C	I	A	S	S	Q	Y	L	A	R	K	R	E	V	E	K	F	N	R	E	N	R	W	K	K	R	G	L	C	I	I	P	T	K	F	G	I	S	F	T	L	P	F	L	N	Q	G	G	A	L	V	H	V	Y	T	D	G	S	V	L	L	T	H	G
Template Known Secondary structure		T			B			S															T														S		S	S															S		S	S	G	G	G											T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		955	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		M	T	D	I	G	T	G	S	Y	T	I	L	A	Q	T	A	A	E	M	L	G	V	P	L	E	Q	V	A	V	H	L	G	D	S	S	.	F	P	V	S	A	G	S	G	G	Q	W	G	A	N	T	S	T	S	G	V	Y	A	A	C	M	K	L	R	E	M	I	A	S	A	V	G	F	D	P	E	Q	S	Q	F
Query Conservation																																					.
Alig confidence																																					.																																					.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		G	T	E	M	G	Q	G	L	H	T	K	M	V	Q	V	A	S	R	A	L	K	I	P	T	S	K	I	H	I	S	E	T	S	T	N	T	V	P	N	T	S	P	T	A	A	S	A	S	A	D	L	N	G	Q	G	V	Y	E	A	C	Q	T	I	L	K	R	L	E	P	F	K	K	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S	S														T	T	S		G	G	G								T	T	T	S		S				S		T	T	T																										.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		1035	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.														.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	G	K	I	T	N	G	T	R	S	A	T	L	H	E	A	T	A	G	G	R	L	T	A	E	E	S	I	E	F	G	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	E	Y	Q	Q	S	T	F	A	G	H	F	V	E	V	G	V	H	S	A	T	G	E	V	R	V	R	R	M	L	A	V
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	K	P	T	G	P	W	E	A	W	V	M	D	A	Y	T	S	A	V	S	L	S	A	T	G	F	Y	K	T	P	N	L	G	Y	S	F	E	T	N	S	G	N	P	F	H	Y	F	S	Y	G	V	A	C	S	E	V	E	I	D	C	L	T	G	D	H	K	N	L	R	T	D	I	V
Template Known Secondary structure		.	.	.	.	.	.	.		S	T	T	S												T	T												T	T				B	T	T	T	T	B	S				S															T	T	T	S		B				B
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									1107	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.		.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		C	A	A	G	R	I	L	N	P	K	T	A	R	S	Q	V	I	G	A	M	T	M	G	M	G	A	A	L	M	E	E	L	A	V	D	D	R	L	G	Y	F	V	N	H	D	M	A	G	Y	E	V	P	V	H	A	D	I	P	.	K	Q	E	V	I	F	L	D	D	T	D	P	I	S	S	P	M	K	A	K	G
Query Conservation																																																												.
Alig confidence																																							.																					.
Template Conservation																																							.
Template Sequence		M	D	V	G	S	S	L	N	P	A	I	D	I	G	Q	V	E	G	A	F	V	Q	G	L	G	L	F	T	M	E	E	L	H	Y	S	P	E	.	G	S	L	H	T	R	G	P	S	T	Y	K	I	P	A	F	G	S	I	P	I	E	F	R	V	S	L	L	R	D	C	P	N	K	R	A	I	Y	A	S	K	A
Template Known Secondary structure					B	S		S																						T					B		T	T	.	S		B				S	T	T	T	S					G	G	G	S		S	S							S	S				T	T	T	G	G	G	B
Template Predicted Secondary structure																																							.
Template SS confidence
		1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.		.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.
		690	.	.	.	.	.	.	.	.	.	700				.	.	.	.	.	.	.	.	.				710	.	.	.	.	.	.	.						.	.	720	.	.	.	.	.	.	.	.	.	730
Predicted Secondary structure													.	.	.										.	.	.									.	.	.	.	.
Query SS confidence													.	.	.										.	.	.									.	.	.	.	.
Query Sequence		V	G	E	L	G	L	C	G	V	S	A	.	.	.	A	I	A	N	A	V	Y	N	A	.	.	.	T	G	I	R	V	R	D	Y	.	.	.	.	.	P	I	T	L	D	K	L	L	D	K	L	P	D
Query Conservation													.	.	.										.	.	.									.	.	.	.	.
Alig confidence													.	.	.										.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		V	G	E	P	P	L	F	L	A	S	S	I	F	F	A	I	K	D	A	I	R	A	A	R	A	Q	H	G	D	N	A	K	Q	L	F	Q	L	D	S	P	A	T	P	E	K	I	R	N	A	C	V	D
Template Known Secondary structure			S	S	G	G	G	G	G	G																T	T	S	S			S		S	S					B	S										S		S
Template Predicted Secondary structure
Template SS confidence
		1259	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310