Job Description P77489 Confidence 100.00% Date Thu Jan 5 12:29:50 GMT 2012 Rank 5 Aligned Residues 713 % Identity 23% Template c1t3qB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:quinoline 2-oxidoreductase large subunit; PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86 Resolution 1.80 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Q	L	K	V	V	G	R	P	H	D	R	I	D	G	P	L	K	T	T	G	T	A	R	Y	A	Y	E	W	H	E	E	A	P	N	A	A	Y	G	Y	I	V	G	S	A	I	A	K	G	R	L	T	A	L	D	T	D	A	A	Q	K	A	P	G	V	L	A	V	I	T	A	S	N	A	G	A	L	G	K	.	.
Query Conservation																																																																																.	.
Alig confidence																														.	.																																																	.	.
Template Conservation																														.	.
Template Sequence		K	K	K	S	I	G	T	S	V	L	R	R	E	D	T	R	L	L	T	G	R	G	R	Y	I	A	D	L	.	.	V	L	S	G	M	L	H	V	A	S	L	R	S	P	F	A	H	A	R	I	V	S	I	D	V	A	D	A	Q	A	L	P	G	V	E	L	V	W	C	G	A	D	V	A	E	L	S	Q	G	I
Template Known Secondary structure				S	S	T	T	S					T	T						T	T				B	G	G	G		.	.			T	T										S	S	S	S														S	T	T												T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
										92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																																								.
Query SS confidence		.	.	.	.	.	.	.	.																																																																								.
Query Sequence		.	.	.	.	.	.	.	.	G	D	K	N	T	A	R	L	L	G	G	P	T	I	E	H	Y	H	Q	A	I	A	L	V	V	A	E	T	F	E	Q	A	R	A	A	A	S	L	V	Q	A	H	Y	R	R	N	K	G	A	Y	S	L	A	D	E	K	Q	A	V	N	Q	P	P	E	D	T	P	D	K	N	V	.
Query Conservation		.	.	.	.	.	.	.	.																																																																								.
Alig confidence		.	.	.	.	.	.	.	.																																																																								.
Template Conservation
Template Sequence		V	A	T	M	Q	V	E	G	F	Q	T	T	I	Q	P	L	L	A	N	G	V	T	R	F	V	G	E	I	V	A	V	V	V	A	S	S	R	A	I	A	E	D	A	A	Q	L	I	Q	V	E	Y	E	E	L	P	A	V	T	G	I	E	A	A	L	E	G	E	A	R	A	N	D	T	L	A	G	N	V	V	S
Template Known Secondary structure						S	S	T	T								S	S			S				S	T	T									S	S									T	T													S								S			S		T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
								163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																							.	.
Query SS confidence		.	.	.	.	.	.																																							.	.
Query Sequence		.	.	.	.	.	.	G	D	F	D	G	A	F	T	S	A	A	V	K	I	D	A	T	Y	T	T	P	D	Q	S	H	M	A	M	E	P	H	A	S	M	A	V	W	D	.	.	G	N	K	L	T	L	W	T	S	N	Q	M	I	D	W	C	R	T	D	L	A	K	T	L	K	V	P	V	E	N	V	R	I	I
Query Conservation		.	.	.	.	.	.																																							.	.
Alig confidence		.	.	.	.	.	.																																							.	.
Template Conservation
Template Sequence		R	T	S	R	A	R	D	E	L	A	P	I	F	A	S	S	A	G	V	V	R	G	Q	F	S	C	G	R	V	S	A	C	P	M	E	T	R	G	A	V	A	Q	Y	E	W	T	T	Q	Q	L	I	L	W	T	A	T	Q	M	P	S	F	V	R	T	M	V	A	M	F	C	A	I	P	E	H	L	I	E	V	R
Template Known Secondary structure																	S	S											B	B					S	S										T	T	T	T									S														T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	Y	I	G	G	G	F	G	G	K	L	F	L	R	S	D	A	L	L	A	A	L	A	A	R	A	V	K	R	P	V	K	V	M	L	P	R	P	S	I	P	N	N	T	T	H	R	P	A	T	L	Q	H	L	R	I	G	A	D	Q	S	G	K	I	T	A	I	S	H	E	S	W	S	G	N	L	P	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	D	V	G	G	G	F	G	Q	K	A	H	L	H	P	E	E	L	L	V	C	L	L	S	R	A	L	G	R	P	V	R	W	I	E	D	R	Q	E	N	F	L	G	A	T	H	A	K	Q	Q	R	N	E	M	G	L	A	F	D	G	D	G	R	F	L	A	L	E	N	R	S	I	T	D	G	G	A	Y	N
Template Known Secondary structure				B		S			T	T	T	T	S	S																T	S															S		B	B													T	T																S	S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		315									.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	.	.	.	P	E	T	A	V	Q	Q	S	E	L	L	Y	A	G	A	N	R	H	T	G	L	R	L	A	T	L	D	L	P	E	G	N	A	M	R	A	P	G	E	A	P	G	L	M	A	L	E	I	A	I	D	E	L	A	E	K	A	G	I	D	P	V	E	F	R	I	L	N	D	T	Q
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	P	W	T	Q	L	V	E	S	H	V	G	N	A	V	I	L	G	V	Y	K	V	P	A	V	S	E	E	S	I	A	V	A	T	N	K	C	P	I	G	A	Y	R	G	V	G	F	T	A	G	Q	I	A	R	E	T	L	I	D	R	A	A	R	Q	L	G	L	S	P	F	E	I	R	R	R	N	V	V	M
Template Known Secondary structure			T	T	T		G	G	G	T							T	T	T	T	T	B			S												S	S	S		B				T	T	T	T																				T									T	T	B
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.					.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.														.	.	.	.
Predicted Secondary structure											.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	P	A	D	P	T	R	C	.	.	.	.	F	S	R	R	Q	L	I	E	C	L	R	T	G	A	D	K	F	G	W	K	Q	R	N	A	T	P	G	Q	V	R	D	G	E	W	L	V	G	H	G	V	A	A	G	F	R	N	N	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	G	A
Query Conservation											.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	D	F	P	F	T	N	R	L	G	Q	T	H	R	E	G	T	Y	L	Q	T	I	N	L	L	E	E	M	V	N	P	E	A	F	R	Q	R	Q	A	E	A	R	A	R	G	K	Y	L	G	L	G	V	S	V	F	N	E	V	T	G	T	G	T	R	T	L	S	F	L	G	T	P	T	T	T	H	D	S	A
Template Known Secondary structure		G	G	G		S				T	T	S					S																												T	T	T															S									T	T							B
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	H	L	E	Q	N	G	T	V	T	V	E	T	D	M	T	D	I	G	T	G	S	Y	T	I	L	A	Q	T	A	A	E	M	L	G	V	P	L	E	Q	V	A	V	H	L	G	D	S	S	F	P	V	S	A	G	S	G	G	Q	W	G	A	N	T	S	T	S	G	V	Y	A	A	C	M	K	L	R	E	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	R	I	D	P	T	G	K	V	T	V	T	T	S	L	A	S	S	G	Q	G	H	E	T	T	L	A	Q	I	A	A	D	V	L	G	V	P	A	S	D	V	V	I	Q	A	G	S	T	K	N	T	Y	G	F	G	A	Y	A	S	R	G	A	V	I	G	A	G	S	I	G	R	A	A	S	I	V	R	E	R
Template Known Secondary structure							T	T	S							S				S	S	S															T	S		G	G	G						S	B	T	T	S			B			S		T	T
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
		530					.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.				550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.									.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure			.	.	.	.																				.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.																				.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		I	.	.	.	.	A	S	A	V	G	F	D	P	E	Q	S	Q	F	A	D	G	K	I	T	.	.	.	N	G	T	R	S	A	T	L	H	E	A	T	A	G	G	R	L	T	.	.	.	.	.	.	.	.	A	E	E	S	I	E	F	G	T	L	S	K	E	Y	Q	Q	S	T	F	A	G	H	F	V	E	V	G
Query Conservation			.	.	.	.																				.	.	.																			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.																				.	.	.																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	Q	L	A	G	H	L	L	E	A	A	S	E	D	I	V	I	E	D	G	L	V	H	V	A	G	V	P	A	K	G	M	P	F	A	E	V	V	G	A	A	Y	F	A	D	A	T	H	P	P	G	F	D	A	T	L	E	A	T	A	T	Y	D	P	S	D	L	V	L	A	N	G	G	H	A	A	I	V	E
Template Known Secondary structure											T	S		G	G	G					T	T					T	T																			G	G	G			T	T														S	S
Template Predicted Secondary structure
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	S	A	T	G	E	V	R	V	R	R	M	L	A	V	C	A	A	G	R	I	L	N	P	K	T	A	R	S	Q	V	I	G	A	M	T	M	G	M	G	A	A	L	M	E	E	L	A	V	D	D	R	L	G	Y	F	V	N	H	D	M	A	G	Y	E	V	P	V	H	A	D	I	P	K	Q	E	V	I	F
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		I	D	A	S	T	Y	A	T	R	V	T	D	F	F	A	V	E	D	C	G	T	M	I	N	P	M	I	V	E	G	Q	I	R	G	G	I	A	Q	A	I	G	Q	T	L	L	E	E	V	I	Y	D	D	F	.	G	Q	L	V	T	T	T	L	M	D	Y	L	I	P	T	T	L	D	V	P	D	I	R	I	R	H
Template Known Secondary structure				T	T	T															B	S		S																						T			B		B		T	T	.	S		B				S	T	T	T	S					T	T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700		.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.				.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		L	D	D	T	D	P	I	S	S	P	M	K	A	K	G	V	G	E	L	G	L	C	G	V	S	A	A	I	A	N	A	V	Y	N	A	T	G	.	.	.	I	R	V	R	D	Y	P	I	T	L	D	K	L	L	D	K	L	P	D
Query Conservation																																							.	.	.
Alig confidence								.																															.	.	.
Template Conservation								.
Template Sequence		L	E	T	P	S	P	.	L	V	P	G	G	I	K	G	M	G	E	S	A	M	I	S	A	P	A	A	V	V	A	A	V	N	D	A	L	A	H	L	E	V	V	I	E	T	V	P	I	T	P	E	R	I	F	R	S	I	Q	E
Template Known Secondary structure							T	.	T	S	G	G	G	B				T	T																			G	G	G	T							S												T
Template Predicted Secondary structure								.
Template SS confidence
		727	.	.	730	.	.		.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.