Job Description P37348 Confidence 19.14% Date Thu Jan 5 11:55:24 GMT 2012 Rank 22 Aligned Residues 155 % Identity 14% Template c3ngfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis Resolution 1.80 Å

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure									.																						.																																.
Query SS confidence									.																						.																																.
Query Sequence		M	I	Y	I	G	L	P	.	Q	W	S	H	P	K	W	V	R	L	G	I	T	S	L	E	E	Y	A	R	H	.	F	N	C	V	E	G	N	T	T	L	Y	A	L	P	K	P	E	V	V	L	R	W	R	E	Q	T	T	D	D	F	R	.	F	C	F	K	F	P	A	T	I	S	H	Q	A	A	L	R	H	C
Query Conservation									.																						.																																.
Alig confidence									.							.	.														.							.	.																								.
Template Conservation																.	.																					.	.
Template Sequence		M	P	R	F	A	A	N	L	S	T	M	F	N	E	.	.	V	P	F	L	E	R	F	R	L	A	A	E	A	G	F	G	G	V	E	F	.	.	L	F	P	Y	D	F	D	A	D	V	I	A	R	E	L	K	Q	H	N	L	T	Q	V	L	F	N	M	P	P	G	D	W	A	A	G	E	R	G	M	A	A	I
Template Known Secondary structure									T	T	T	S		T	T	.	.	S												T	T		S					.	.	S			T	T	S												T	T											S		T	T	T	T			B		T	T
Template Predicted Secondary structure																.	.																					.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																		.	.	.	.	.	.	.	.	.														.								.	.	.	.	.
Query SS confidence																		.	.	.																		.	.	.	.	.	.	.	.	.														.								.	.	.	.	.
Query Sequence		D	D	L	V	T	E	F	L	T	R	M	S	P	L	A	P	.	.	.	R	I	G	Q	Y	W	L	Q	L	P	A	T	F	G	P	R	E	.	.	.	.	.	.	.	.	.	L	P	A	L	W	H	F	L	D	S	L	P	G	.	E	F	N	Y	G	V	E	.	.	.	.	.	V	R	H	P	Q	F	F	A	K
Query Conservation																		.	.	.																		.	.	.	.	.	.	.	.	.														.								.	.	.	.	.
Alig confidence																		.	.	.																		.	.	.	.	.	.	.	.	.														.								.	.	.	.	.
Template Conservation
Template Sequence		S	G	R	E	Q	E	F	R	D	N	V	D	I	A	L	H	Y	A	L	A	L	D	C	R	T	L	H	A	M	S	G	I	T	E	G	L	D	R	K	A	C	E	E	T	F	I	E	N	F	R	Y	A	A	D	K	L	A	P	H	G	I	T	V	L	V	E	P	L	N	T	R	N	M	P	G	Y	F	I	V	H
Template Known Secondary structure		T	T																			T	T								B		B		T	T	S																					G	G	G	T										T	T	T	S	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	E	E	Q	T	L	N	R	G	L	H	Q	R	G	V	N	R	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	E	A	V	G	L	V	K	R	V	N	R	P	N	V	A	V	Q	L
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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