|   |
3 | . | . | . | |
|
. | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
| . | . |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |
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|  |
Query SS confidence |   |
|
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| . |
. |
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| . |
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Query Sequence |   |
Y | I | G | L | . |
. |
P | Q | W | S | H | P | K | W | V | R | L | G | I | T | S | L | E | E | Y | A | R | H | . |
F | N | C | V | E | G | N | T | T | L | Y | A | L | P | K | P | E | V | V | L | R | W | R | E | Q | T | T | D | D | F | R | F | C | F | K | F | P | A | T | I | S | H | Q | A | A | L | R | H | C | D | D |
Query Conservation |   |
  |
|
|
| . | . |
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|   |   |   |
|   |
|   |   |
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|   |
|   |   |
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|   |   | . |
|   |   |
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|   |
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|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |
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|   |
|   |
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|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
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| . | . |
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| . |
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| . |
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| . |
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Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | H | G | I | Y | Y | S | Y | W | E | H | . |
E | W | S | A | K | F | G | P | Y | I | E | K | V | A | K | L | G | F | D | I | I | E | V | A | A | H | H | I | N | E | Y | S | D | A | E | L | A | T | I | R | K | S | A | . |
K | D | N | G | I | I | L | T | A | G | I | G | P | S | K | T | K | N | L | S | S | E | D | A |
Template Known Secondary structure |   |
 |  |  |  |  | G | G | G | G |
| S | . |
| T | T |
|
|
| T | T |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | . |  |  | T | T |
|  |  |  |  |  |  |
|
|
| T | T | S |
| T | T |
| S | S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
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|  |  |  |  |  |  |
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|  |
Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | |
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
80 | . | |
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
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. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
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|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
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|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
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|  |  |  |  |  |
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Query SS confidence |   |
|
| . |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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. |
. |
. |
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Query Sequence |   |
L | V | . |
. |
. |
. |
T | E | F | L | T | R | M | S | P | L | A | P | R | I | G | Q | Y | W | L | Q | L | P | A | T | F | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | R | E | L | P | A | L | W | H | F | L | D | S | L | . |
. |
. |
. |
. |
P | G | E | F | N | Y | G | V | E | V | R | H | P | Q | F | F | A | K |
Query Conservation |   |
  |   | . | . | . | . |   |   |
|   |   |   |   |   |
|
|   |   |
|
|
|   |
|
|   |
|   |
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|
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|
|   |   |
| . | . | . | . | . |   |   |   |   |   |   |
|
|
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|   |
|
|   |   |   |
Alig confidence |   |
|
| . | . | . | . |
|
|
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| . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . |
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|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | V | R | A | A | G | K | A | F | F | E | R | T | L | S | N | V | A | K | L | D | I | H | T | I | G | G | A | L | H | S | Y | W | P | I | D | Y | S | Q | P | V | D | K | A | G | D | Y | A | R | G | V | E | G | I | N | G | I | A | D | F | A | N | D | L | G | I | N | L | C | I | E | V | L | N | R | F | E | N | H | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| T | T | S |
| S | S |
|
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
|
| T | T | T |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
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|
|
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|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
. | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | E | E | Q | T | L | N | R | G | L | H | Q | . |
. |
R | G | V | N | R | V | I | L | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   | . | . |   |   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |
|
Template Sequence |   |
L | N | T | A | A | E | G | V | A | F | V | K | D | V | G | K | N | N | V | K | V | X | L | D |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
  |