 |
Job Description | P0AA39 | Confidence | 70.58% | Date | Thu Jan 5 11:11:50 GMT 2012 |
Rank | 56 | Aligned Residues | 67 |
% Identity | 19% | Template | d1xo3a_ |
SCOP info | beta-Grasp (ubiquitin-like)
| MoaD/ThiS
| C9orf74 homolog
|
Resolution | UNK |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | |
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |
|
|  |  |  |
|
| . | . | . | . |
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | S | V | K | I | V | A | I | T | A | D | E | A | G | Q | R | I | D | N | F | L | R | T | Q | L | K | G | V | P | K | S | M | I | Y | R | I | L | R | K | G | E | . |
. |
. |
. |
. |
. |
V | R | V | N | K | K | R | I | K | P | . |
. |
. |
. |
E | Y | K | L | E | A | G | D | E | V | R | I | P | P | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   | . | . | . | . | . | . |
|   |
|
|
|   |   |   |   |   | . | . | . | . |   |   |   |
|   |   |
|
|   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |
|   |
|   |   |
|   |
|   |
|
|
|
|
|   |   |   |
|   |
Template Sequence |   |
G | V | K | K | H | Q | V | A | L | P | G | Q | E | E | P | W | D | I | R | N | L | L | V | W | I | K | K | N | L | L | K | E | R | P | E | L | F | I | Q | G | D | S | V | R | P | G | I | L | V | L | I | N | D | A | D | W | E | L | L | G | E | L | D | Y | Q | L | Q | D | Q | D | S | I | L | F | I | S | T |
Template Known Secondary structure |   |
T |
|
|
|  |  |  |  |
|
| S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
| G | G | G | S |
|
| T | T | S |
|
| S | S |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T | T | S |
|
|
|
| T | T |
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|