Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA39
Confidence98.83%DateThu Jan 5 11:11:50 GMT 2012
Rank18Aligned Residues55
% Identity20%Templated1vioa2
SCOP infoAlpha-L RNA-binding motif Alpha-L RNA-binding motif Pseudouridine synthase RsuA N-terminal domain
Resolution1.59

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50..... ....60.........70.....
Predicted Secondary structure 












.













Query SS confidence 



































.



















Query Sequence  QRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIK. PEYKLEAGDEVRIPPVRVAE
Query Conservation   

   
       

      
  
 
 


    .    
  

 
 
       
Alig confidence 










.























.



















Template Conservation 



  
    .  

  
  

  
 
 


  
   
  
   
 
 
 
    
Template Sequence  LRLDKFIAENV. GLTRSQATKAIRQSAVKINGEIVKSGSVQISQEDEIYFEDELLTW
Template Known Secondary structure  .T

TT
TT


TT

TTS
TT


Template Predicted Secondary structure 


.






















Template SS confidence 
























































   1........10. ........20.........30.........40.........50......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions