Job Description P0AA39 Confidence 100.00% Date Thu Jan 5 11:11:50 GMT 2012 Rank 12 Aligned Residues 144 % Identity 21% Template d1vioa1 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase RsuA/RluD Resolution 1.59

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	D	H	I	L	V	L	N	K	P	S	G	T	A	V	H	G	G	S	G	L	S	F	G	V	I	E	G	L	R	A	L	R	P	E	A	R	F	L	E	L	V	H	R	L	D	R	D	T	S	G	V	L	L	V	A	K	K	R	S	A	L	R	S	L	H	E	Q	L	R	E	K	G	M	Q	K	D	Y	L
Query Conservation
Alig confidence																							.	.													.	.																														.	.
Template Conservation																							.	.													.	.																														.	.
Template Sequence		E	E	G	Q	Y	F	M	L	N	K	P	Q	G	C	V	C	S	N	D	D	Y	.	.	P	T	I	Y	Q	F	F	D	Y	P	L	A	.	.	G	K	L	H	S	A	G	R	L	D	V	D	T	T	G	L	V	L	L	T	D	D	G	Q	W	S	H	R	I	.	.	T	S	P	K	H	H	C	E	K	T	Y	L
Template Known Secondary structure													T	T		B	S	S					.	.		B	G	G	G	G	S		T	T	G	G	.	.	G	G				S	S				T	T									S									.	.			T	T	S
Template Predicted Secondary structure																							.	.													.	.																														.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	R	G	Q	W	Q	S	H	V	K	S	V	Q	A	P	L	L	K	N	I	L	Q	S	G	E	R	I	V	R	V	S	Q	E	G	K	P	S	E	T	R	F	K	V	E	E	R	Y	A	F	A	T	L	V	R	C	S	P	V	T	G	R	T	H	Q	I	R	V	H	T	Q	Y	A	G	H	P	I	A	F
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		V	T	L	A	D	P	V	E	E	N	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	C	A	E	G	I	L	L	R	G	E	K	E	P	T	K	P	A	K	L	E	I	L	D	D	.	Y	N	V	N	L	T	I	S	E	G	R	Y	H	Q	V	K	R	M	F	A	A	L	G	N	K	V	V	G
Template Known Secondary structure					S	S				T	T			.	.	.	.	.	.	.	.	.	.	.	.	.										T	T		S	S											S	S	.	S							S				T	T									T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.														.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		258	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	R	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions