Job Description P0AA39 Confidence 100.00% Date Thu Jan 5 11:11:50 GMT 2012 Rank 1 Aligned Residues 225 % Identity 98% Template d1v9ka_ SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase RsuA/RluD Resolution 2.00

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Y	E	D	D	H	I	L	V	L	N	K	P	S	G	T	A	V	H	G	G	S	G	L	S	F	G	V	I	E	G	L	R	A	L	R	P	E	A	R	F	L	E	L	V	H	R	L	D	R	D	T	S	G	V	L	L	V	A	K	K	R	S	A	L	R	S	L	H	E	Q	L	R	E	K	G	M	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	X	Y	E	D	D	H	I	L	V	L	N	K	P	S	G	T	A	V	H	G	G	S	G	L	S	F	G	V	I	E	G	L	R	A	L	R	P	E	A	R	F	L	E	L	V	H	R	L	D	R	D	T	S	G	V	L	L	V	A	K	K	R	S	A	L	R	S	L	H	E	Q	L	R	E	K	G	X	Q	K
Template Known Secondary structure							S	S								T	T	S		S	S			S	S	S												S	T	T		S					S	S				T	T									S	S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	L	A	L	V	R	G	Q	W	Q	S	H	V	K	S	V	Q	A	P	L	L	K	N	I	L	Q	S	G	E	R	I	V	R	V	S	Q	E	G	K	P	S	E	T	R	F	K	V	E	E	R	Y	A	F	A	T	L	V	R	C	S	P	V	T	G	R	T	H	Q	I	R	V	H	T	Q	Y	A	G	H	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	L	A	L	V	R	G	Q	W	Q	S	H	V	K	S	V	Q	A	P	L	L	K	N	I	L	Q	S	G	E	R	I	V	R	V	S	Q	E	G	K	P	S	E	T	R	F	K	V	E	E	R	Y	A	F	A	T	L	V	R	C	S	P	V	T	G	R	T	H	Q	I	R	V	H	T	Q	Y	A	G	H	P
Template Known Secondary structure									S				T	T														T	T	S								T	T	S	B													S	S									S	S			T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	F	D	D	R	Y	G	D	R	E	F	D	R	Q	L	T	E	A	G	T	G	L	N	R	L	F	L	H	A	A	A	L	K	F	T	H	P	G	T	G	E	V	M	R	I	E	A	P	M	D	E	G	L	K	R	C	L	Q	K	L	R	N	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	F	D	D	R	Y	G	D	R	E	F	D	R	Q	L	T	E	A	G	T	G	L	N	R	L	F	L	H	A	A	A	L	K	F	T	H	P	G	T	G	E	V	X	R	I	E	A	P	X	D	E	G	L	K	R	C	L	Q	K	X	R	N	A	R
Template Known Secondary structure		B	T	T		T	T	T	S											T	T					S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions