Job Description P0AA39 Confidence 100.00% Date Thu Jan 5 11:11:50 GMT 2012 Rank 11 Aligned Residues 144 % Identity 23% Template d1kska4 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase RsuA/RluD Resolution 2.00

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	I	L	V	L	N	K	P	S	G	T	A	V	H	G	G	S	G	L	S	F	G	V	I	E	G	L	R	A	L	R	P	E	A	R	F	L	E	L	V	H	R	L	D	R	D	T	S	G	V	L	L	V	A	K	K	R	S	A	L	R	S	L	H	E	Q	L	R	E	K	G	M	Q	K	D	Y	L	A	L
Query Conservation
Alig confidence																																			.	.																																.	.
Template Conservation																																			.	.																																.	.
Template Sequence		P	R	Y	F	X	L	N	K	P	Q	G	Y	V	C	S	T	D	D	P	D	H	P	T	V	L	Y	F	L	D	E	P	V	A	.	.	W	K	L	H	A	A	G	R	L	D	I	D	T	T	G	L	V	L	X	T	D	D	G	Q	W	S	H	R	I	T	S	.	.	P	R	H	H	C	E	K	T	Y	L	V	T
Template Known Secondary structure											T	T		B	S	S	S	S		S	S	S		B	G	G	G	G				T	T	G	.	.	G	G				S	S				T	T									S											.	.	T	T	S
Template Predicted Secondary structure																																			.	.																																.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	G	Q	W	Q	S	H	V	K	S	V	Q	A	P	L	L	K	N	I	L	Q	S	G	E	R	I	V	R	V	S	Q	E	G	K	P	S	E	T	R	F	K	V	E	E	R	Y	A	F	A	T	L	V	R	C	S	P	V	T	G	R	T	H	Q	I	R	V	H	T	Q	Y	A	G	H	P	I	A	F	D	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		L	E	S	P	V	A	D	D	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	F	A	K	G	V	Q	L	H	N	E	K	D	L	T	K	P	A	V	L	E	V	I	T	P	.	T	Q	V	R	L	T	I	S	E	G	R	Y	H	Q	V	K	R	X	F	A	A	V	G	N	H	V	V	E	L	H
Template Known Secondary structure			S	S				T	T			.	.	.	.	.	.	.	.	.	.	.	.	.										T	T		S	S												T	.	T							S				T	T									T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.														.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		202	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions