Job Description P0AA39 Confidence 97.34% Date Thu Jan 5 11:11:50 GMT 2012 Rank 30 Aligned Residues 144 % Identity 17% Template c3uaiA_ PDB info PDB header:isomerase/chaperone Chain: A: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces2 cerevisiae Resolution 3.06 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	D	D	H	I	L	V	L	N	K	P	S	G	T	A	V	H	G	G	S	G	L	S	F	G	V	I	E	G	L	R	A	L	R	P	E	A	R	F	L	E	L	V	H	R	L	D	R	D	T	S	G	V	L	L	V	A	K	K	R	S	A	L	R	S	L	H	E	Q	L	R	E	K	G	M	Q	K	D	Y
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																																				.	.													.	.
Template Conservation																				.	.	.	.	.	.	.	.																																				.	.													.	.
Template Sequence		Y	I	S	S	G	V	I	N	L	D	K	P	S	N	P	S	S	H	.	.	.	.	.	.	.	.	E	V	V	A	W	I	K	R	I	L	R	C	E	K	T	G	H	S	G	T	L	D	P	K	V	T	G	C	L	I	V	C	I	D	R	.	.	A	T	R	L	V	K	S	Q	Q	G	A	G	.	.	K	E	Y
Template Known Secondary structure				T	T									S	S	S				.	.	.	.	.	.	.	.													S					S			S	S	S	S										G	G	.	.	G	G	G	G						S	S		.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																																				.	.													.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.									.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120			.	.	.
		177	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		L	A	.	L	V	R	G	Q	W	Q	S	H	V	K	S	V	Q	A	P	L	L	K	N	I	L	Q	S	G	E	R	I	V	R	V	S	Q	E	G	K	P	S	E	T	R	F	K	V	E	E	R	Y	A	F	A	T	L	V	R	C	S	P	V	T	G	R	T	H	Q	I	R	V	H	T	Q	Y	A	G
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		V	C	I	V	R	L	H	D	A	L	K	D	E	K	D	L	G	R	S	L	E	N	L	T	G	A	L	F	Q	R	P	P	L	K	R	Q	L	R	V	R	T	I	Y	E	S	N	L	I	E	F	D	N	K	R	N	L	G	V	F	W	A	S	C	E	A	G	T	Y	M	R	T	L	C	V	H	L	G
Template Known Secondary structure								S	S			S	S	T										T																													T	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions