Job Description P0AA39 Confidence 93.86% Date Thu Jan 5 11:11:50 GMT 2012 Rank 45 Aligned Residues 68 % Identity 28% Template c3iz6D_ PDB info PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein s4 (s4e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																						.
Query SS confidence															.																						.
Query Sequence		I	D	N	F	L	R	T	Q	L	K	G	V	P	.	K	S	M	I	Y	R	I	L	R	K	G	E	V	R	V	N	K	K	R	I	K	.	P	E	Y	K	L	E	A	G	D	E	V	R	I	P	P	V	R	V	A	E	R	E	E	E	A	V	S	P	H	L	Q	K	V	A	A	L	A	D	V	I	L	Y	E	D
Query Conservation															.																						.
Alig confidence															.																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	L	I	I	R	N	R	L	K	Y	A	L	T	Y	R	E	V	I	S	I	L	M	Q	R	H	V	L	V	D	G	K	V	R	T	D	K	T	Y	P	A	G	F	M	D	V	I	S	I	P	K	T	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	R	L	L	Y	D	T
Template Known Secondary structure											T	T	S	S		S	S	S	T						T	T					T	T						T	T					T	T							S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																			.	.	100	.	.	.	.	.
		100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	I	L	V	L	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	R	F	R	L	Q	S
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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