Job Description P0AA39 Confidence 96.82% Date Thu Jan 5 11:11:50 GMT 2012
Rank 37 Aligned Residues 52
% Identity 10% Template c2xzmD_
PDB info
PDB header: ribosomeChain: D: PDB Molecule: ribosomal protein s4 containing protein;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
Resolution 3.93 Å
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Show / Hide Conservation and Alignment quality
   
20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . .
. . . . 60 . . .
. . . . . . 70 .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
Q R I D N F L R T Q L K G V P K S M I Y R I L R K G E V R V N K K R I K .
P E Y K L E A G .
.
D E V R I P P V
Query Conservation  
                                                  .             . .          
Alig confidence  
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Template Conservation  
                                                   
Template Sequence  
R R L Q T R V F K L N L A N S I H H S R V L I R Q R H I K V G K N L V N V P S F M V R T D S E K S I D F A S T
Template Known Secondary structure  
T B T T S S S T T T T T T T T S B S T T S S T T S
Template Predicted Secondary structure  
Template SS confidence  
   
107 . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]