Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA39
Confidence99.46%DateThu Jan 5 11:11:50 GMT 2012
Rank14Aligned Residues83
% Identity19%Templatec2k6pA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:uncharacterized protein hp_1423; PDBTitle: solution structure of hypothetical protein, hp1423
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  QRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYED
Query Conservation   

   
       

      
  
 
 


        
  

 
 
                          




Alig confidence 

























































.......














Template Conservation 



  
       

      
  
 
 


   
 
  
  

 
 
         ....... 
        
 


Template Sequence  MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAKASKEVKAGDTISLHYLKGIEEY. . . . . . . TILQIPALKNVPRKD
Template Known Secondary structure 
BSTTTTS




SS

T

TT

TT
B

TT


SS

.......





S


SSS
Template Predicted Secondary structure 



























.......









Template SS confidence 















































































   1........10.........20.........30.........40.........50........ .60.........70...
 
   100.........
Predicted Secondary structure 




Query SS confidence 









Query Sequence  DHILVLNKPS
Query Conservation     





 
Alig confidence 









Template Conservation    
 

 
  
Template Sequence  THLYIAPKTK
Template Known Secondary structure  TTSS


Template Predicted Secondary structure 




Template SS confidence 









   74.....80...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions