 |
| Job Description | P0AA39 | | Confidence | 42.23% | Date | Thu Jan 5 11:11:50 GMT 2012 |
| Rank | 75 | Aligned Residues | 22 |
| % Identity | 27% | Template | c1yj5C_ |
| PDB info |
PDB header:transferase | Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; |
PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
|
| Resolution | 2.80 Å |
|
| | |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | |  |
|
| | | |
|
|
|
| | . | . | |
|
|
|
| | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| Query Sequence | |
V | R | V | N | K | K | R | I | K | P | E | Y | K | . |
. |
L | E | A | G | D | E | V | R | I |
| Query Conservation | |
| |
|
|
| | | | | | | | | . | . |
| | |
|
| |
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
|
| | |
| | | | | | | |
| | |
|
| |
| |
|
| Template Sequence | |
S | T | V | G | V | H | E | L | K | P | G | L | S | G | S | L | S | L | G | D | V | L | Y | L |
| Template Known Secondary structure | |
| | | T | T | | |
|
| T | T |
| | | | |
| T | T |
| | | | S |
| Template Predicted Secondary structure | |
| | | | | | | |
|
|
|
| | | | |
|
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
