Job Description P0AGE6 Confidence 34.41% Date Thu Jan 5 11:28:54 GMT 2012 Rank 184 Aligned Residues 116 % Identity 11% Template c3u80A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:3-dehydroquinate dehydratase, type ii; PDBTitle: 1.60 angstrom resolution crystal structure of a 3-dehydroquinate2 dehydratase-like protein from bifidobacterium longum Resolution 1.60 Å

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		5		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	Q	V	V	T	L	L	G	S	L	R	K	G	S	F	N	G	M	V	A	R	T	L	P	K	I	A	P	A	S	M	E	V	N	A	L	P	S	I	A	D	I	P	L	Y	D	A	D	V	Q	Q	E	E	G	F	P	A	T	V	E	A	L	A	E	Q	I	R	Q	A	D	G	V	V	I	V	T	P	E	Y
Query Conservation			.
Alig confidence			.								.																													.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation											.																													.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		M	T	K	V	I	V	V	N	G	.	P	N	L	R	Q	D	L	D	T	L	R	K	L	C	A	E	W	G	K	D	L	G	L	E	V	E	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	D	D	E	A	E	M	V	R	W	M	H	Q	A	A	D	E	K	T	P	.	V	V	M	N	P	A	A
Template Known Secondary structure											.	S																				T	T							.	.	.	.	.	.	.	.	.	.	.	.	.			S																T			.						T	T
Template Predicted Secondary structure											.																													.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																	.	.	.				.	.	.	.	.	.
Query SS confidence																	.	.	.				.	.	.	.	.	.
Query Sequence		N	Y	S	V	P	G	G	L	K	N	A	I	D	W	L	.	.	.	S	R	L	.	.	.	.	.	.	P	D	Q	P	L	A	G	K	P	V	L	I	Q	T	S	S	M	G	V	I	G	G	A	R	C	Q	Y	H	L	R	Q	I	L	V
Query Conservation																	.	.	.				.	.	.	.	.	.
Alig confidence																	.	.	.				.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	H	Y	S	Y	A	L	A	D	A	A	H	M	V	I	D	E	N	L	P	L	M	E	V	H	I	S	N	P	S	V	I	S	P	V	A	T	G	T	I	T	G	M	G	F	Y	G	Y	K	L	A	L	D	A	V	A	H	L	L	S
Template Known Secondary structure				S															T	T								S	S					S					S					S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions