Job Description P0AGE6 Confidence 85.63% Date Thu Jan 5 11:28:54 GMT 2012 Rank 82 Aligned Residues 149 % Identity 12% Template c3rggD_ PDB info PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air Resolution 1.82 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		K	L	Q	V	V	T	L	L	G	S	L	R	K	G	S	F	N	G	M	V	A	R	T	L	P	K	I	A	P	A	S	M	E	V	N	A	L	P	S	I	A	D	I	P	L	Y	D	A	D	V	Q	Q	E	E	G	F	P	A	T	V	E	A	L	A	E	Q	I	R	Q	A	D	.	.	G	V	V	I	V	T	P
Query Conservation																																																																									.	.
Alig confidence												.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation												.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	L	V	I	I	L	M	G	S	.	.	.	.	S	S	D	M	G	H	A	E	K	I	A	S	E	L	K	T	F	G	I	E	Y	A	I	R	.	.	.	.	.	.	.	.	.	.	.	I	G	S	A	H	K	T	A	E	H	V	V	S	M	L	K	E	Y	E	A	L	D	R	P	K	L	Y	I	T	I	A
Template Known Secondary structure										S	S	.	.	.	.	G	G	G														T	T							.	.	.	.	.	.	.	.	.	.	.				T	T	T														T	S	S	S
Template Predicted Secondary structure												.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.												.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	N	Y	S	V	P	G	G	L	K	N	A	I	D	W	L	S	R	L	P	D	Q	P	L	A	G	K	P	V	L	I	Q	T	S	S	M	G	V	I	G	G	A	R	C	Q	Y	H	L	R	Q	I	L	V	F	L	D	A	M	V	M	N	K	P	E	F	M	G	G	V	I	Q	N	K	V	D	P	Q	T	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																							.																															.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.																							.																															.	.	.	.	.
Template Sequence		G	R	S	N	A	L	S	G	F	V	.	.	.	.	.	.	.	.	.	.	.	.	D	G	F	V	K	G	A	T	I	A	C	P	P	P	S	D	S	F	A	G	A	D	.	I	Y	S	S	L	R	M	P	S	G	I	S	P	A	L	V	L	E	P	K	N	A	A	L	L	A	A	R	I	F	.	.	.	.	.
Template Known Secondary structure			S	S								.	.	.	.	.	.	.	.	.	.	.	.				S	S	S											G	G	G	G	G	G	.	G								T	T							S	S													.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																							.																															.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.													.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	I	D	Q	G	T	L	D	H	L	T	G	Q	L	T	A	F	G	E	F	I	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	Y	D	K	E	I	A	D	S	V	K	S	Y	M	E	S	N	A	Q	K	I	I	E
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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