Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGE6
Confidence99.44%DateThu Jan 5 11:28:54 GMT 2012
Rank43Aligned Residues142
% Identity15%Templatec3hlyA_
PDB info PDB header:flavoproteinChain: A: PDB Molecule:flavodoxin-like domain; PDBTitle: crystal structure of the flavodoxin-like domain from2 synechococcus sp q5mzp6_synp6 protein. northeast structural3 genomics consortium target snr135d.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  VVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYS
Query Conservation 

 
 

 
  
 
  
       
                                      
  

 

  

 
   
Alig confidence 






..































...............





















..
Template Conservation 




 
.. 



  

  
   
   
 

         ...............           
 

 
 
   ..
Template Sequence  VLIGYLS. . DYGYSDRLSQAIGRGLVKTGVAVEXVDLRAVD. . . . . . . . . . . . . . . PQELIEAVSSARGIVLGTPPSQ. .
Template Known Secondary structure 
T..TSTTTT

TTT

...............
S

BSS..
Template Predicted Secondary structure 
..











...............













..
Template SS confidence 















































































   263...... 270.........280.........290.........300. ........310.........320...
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  VPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQTGEVIDQ
Query Conservation      

  

            
       
 
  
       
   
                          
   
 
Alig confidence 













...





















...



















............





Template Conservation             
  ...     
    


 
  
 
  ... 
   
   
   
      ............   
  
Template Sequence  PSEAVATALSTIFA. . . AAHNKQAIGLFDSYGGDDEPID. . . ALLAQFRNLGLHTAFPPIRV. . . . . . . . . . . . KDQPTE
Template Known Secondary structure 

...

TTS



SSB

...TT
SSS
B

............
SS

Template Predicted Secondary structure 

...











...








............



Template SS confidence 















































































   324.....330....... ..340.........350......... 360.........370......... 380.....
 
   167..170.........180.....
Predicted Secondary structure 
Query SS confidence 


















Query Sequence  GTLDHLTGQLTAFGEFIQR
Query Conservation       
      
      
Alig confidence 


















Template Conservation    
  
 
 
  
   
  
Template Sequence  AIYQQCEESGTDLGQWLTR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


















   386...390.........400....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions