Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGE6
Confidence33.70%DateThu Jan 5 11:28:54 GMT 2012
Rank191Aligned Residues46
% Identity9%Templatec2dlnA_
PDB info PDB header:ligase(peptidoglycan synthesis)Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10..... ....20.........30.........40........
Predicted Secondary structure 








.













Query SS confidence 














.
































Query Sequence  MSEKLQVVTLLGSLR. KGSFNGMVARTLPKIAPASMEVNALPSIADIPL
Query Conservation 
   



 
 

 
.  
 
  
       
                 
Alig confidence 


..









.
































Template Conservation 
  ..

 
  

   
  
 
 
   
  

   
  
  

      
Template Sequence  MTD. . KIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDV
Template Known Secondary structure 

S..


SSTTTT

TTTS
G
Template Predicted Secondary structure 


..









Template SS confidence 
















































   1.. ......10.........20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions