Job Description P0AGE6 Confidence 81.79% Date Thu Jan 5 11:28:54 GMT 2012 Rank 87 Aligned Residues 107 % Identity 17% Template c1rcuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein vt76; PDBTitle: x-ray structure of tm1055 northeast structural genomics2 consortium target vt76 Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	K	L	Q	V	V	T	L	L	G	S	L	R	.	.	K	G	S	F	N	G	M	V	A	R	T	L	P	K	I	A	P	A	S	M	E	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	P	S	I	A	D	I	P	L	Y	D	A	D	V	Q	Q	E
Query Conservation																.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	K	K	V	V	V	V	G	Y	S	G	P	V	N	K	S	P	V	S	E	L	R	D	I	C	L	E	L	G	R	T	L	A	K	K	G	Y	L	V	F	N	G	G	R	D	G	V	X	E	L	V	S	Q	G	V	R	E	A	G	G	T	V	V	G	I	L	P	D	E	E	A	G	N	P	Y	L	S	V	A	V
Template Known Secondary structure												S		T	T	S	T	T	T	G	G	G														T	T								S	S	T												T	T								S	T	T					T	T		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	F	P	A	T	V	E	A	L	A	E	Q	I	R	Q	A	D	G	V	V	I	V	T	P	E	Y	N	Y	S	V	P	G	G	L	K	N	A	I	D	W	L	S	R	L	P	D	Q	P	L	A	G	K	P	V	L	I	Q	T	S	S	M	G	V
Query Conservation
Alig confidence																									.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		K	T	G	L	D	F	Q	X	R	S	F	V	L	L	R	N	A	D	V	V	V	S	I	.	.	.	.	.	G	G	E	I	G	T	A	I	E	I	L	G	A	Y	A	.	.	.	.	.	.	.	L	G	K	P	V	I	L	L	R	G	T	G	G	W
Template Known Secondary structure				S												T	T		S						.	.	.	.	.	S															.	.	.	.	.	.	.		T							T	T	S
Template Predicted Secondary structure																									.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions