Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGE6
Confidence99.54%DateThu Jan 5 11:28:54 GMT 2012
Rank41Aligned Residues147
% Identity15%Templatec1e5dA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase; PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  KLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEY
Query Conservation   



 
 

 
  
 
  
       
                                      
  

 

  

 
Alig confidence 









..































...............




















Template Conservation       


 
..  
 
  

  
   
   
 

    
    ...............       
   
 

 


  
Template Sequence  TNKVVIFYDS. . MWHSTEKMARVLAESFRDEGCTVKLMWCKACH. . . . . . . . . . . . . . . HSQIMSEISDAGAVIVGSPTH
Template Known Secondary structure 
S

..SSSTT
TTTS
...............T
S


B
Template Predicted Secondary structure 





..









...............







Template SS confidence 















































































   252.......260. ........270.........280.........290... ......300.........310....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  NYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQTGEV
Query Conservation         

  

            
       
 
  
       
   
                          
  
Alig confidence 
















...

















...



























...........
Template Conservation             
  
  ...     
   

 
 
  
... 
   
   
   
  

       
 
...........
Template Sequence  NNGILPYVAGTLQYIKG. . . LRPQNKIGGAFGSFGWSG. . . ESTKVLAEWLTGMGFDMPATPVKVKNVP. . . . . . . . . . .
Template Known Secondary structure  TTB

...T


S
SSS
...TT
B

S

SS
...........
Template Predicted Secondary structure 




...











...







...........
Template SS confidence 















































































   315....320.........330. ........340......... 350.........360.........370.......
 
   164.....170.........180.....
Predicted Secondary structure 

Query SS confidence 





















Query Sequence  IDQGTLDHLTGQLTAFGEFIQR
Query Conservation   
      
      
      
Alig confidence  .




















Template Conservation  .   

         
   
  
Template Sequence  . THADYEQLKTMAQTIARALKA
Template Known Secondary structure  .
Template Predicted Secondary structure  .
Template SS confidence 





















   378.380.........390........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions