 |
| Job Description | P32717 | | Confidence | 54.67% | Date | Thu Jan 5 11:50:40 GMT 2012 |
| Rank | 175 | Aligned Residues | 37 |
| % Identity | 16% | Template | d1a04a1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| C-terminal effector domain of the bipartite response regulators
| GerE-like (LuxR/UhpA family of transcriptional regulators)
|
| Resolution | 2.20 |
|
|   |   |
382 | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | T | L | H | L | A | N | Q | G | Y | T | M | N | E | I | G | D | M | I | K | L | P | P | A | L | A | N | N | W | A | S | R | G | Y | Y | G | S | V | S | H | N | A | R | A | V | Y | N | F | Y |
| Query Conservation |   |
|
|
|
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|
|
|
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |   |
|   |   |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
| Template Sequence |   |
D | I | L | K | L | I | A | Q | G | L | P | N | K | M | I | A | R | R | L | D | I | T | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | T | V | K | V | H | V | K | H | M | L | K | K | M |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|