Job Description P32717 Confidence 97.55% Date Thu Jan 5 11:50:40 GMT 2012 Rank 84 Aligned Residues 184 % Identity 14% Template c3rpcD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:possible metal-dependent hydrolase; PDBTitle: the crystal structure of a possible metal-dependent hydrolase from2 veillonella parvula dsm 2008 Resolution 1.49 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170															.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	F	V	E	G	E	K	G	I	I	V	I	D	P	L	V	T	P	P	A	A	K	A	A	L	D	L	Y	F	Q	H	R	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	I	V	A	V	I	Y	T	H	S	H	T	D	H	Y	G	G	V	K	G	I	I	S	E	A	D	V	K	S	G
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		T	G	K	L	T	I	K	N	T	T	F	L	I	D	P	F	L	A	P	K	D	T	Y	P	G	F	E	G	T	F	N	Y	Q	Q	R	X	P	X	V	D	L	P	L	S	X	D	D	L	L	S	N	V	T	A	V	V	V	T	H	T	H	L	D	H	W	D	D	T	A	I	N	S	I	.	.	.	.	P	K	S
Template Known Secondary structure								T	T						S						T	T		B				T	T	B	T	T	T	T	S		B		S	S			S	S							T	T							S				G	G	G	S								S	.	.	.	.		T	T
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	Q	V	I	A	P	A	G	F	M	D	E	A	I	S	E	N	V	L	A	G	N	I	M	S	R	R	A	L	Y	S	Y	G	L	L	L	P	H	N	A	Q	G	N	V	G	N	G	L	G	V	T	L	A	T	G	D	P	S	I	I	A	P	T	K	T	I	V	R	T	G	E	K	M	I	I	D	G	L	E
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	I	F	V	Q	N	T	A	D	K	E	L	I	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	F	I	D	V	R	I	I	F	E	S	L	E	F	N	G	I	T
Template Known Secondary structure		S					S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S						S	S					T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																																														.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		282	.	.	.	.	.	.	.	290																.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.										.	.	.								320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Query Sequence		F	D	F	L	M	T	P	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	P	A	E	M	H	F	Y	I	P	A	L	K	A	L	C	T	A	E	N	A	T	H	T	L	.	.	.	.	.	.	.	.	.	H	N	F	.	.	.	.	.	.	.	Y	T	L	R	G	A	K	T	R	D	T
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	K	T	G	G	S	H	G	T	V	E	X	Y	A	N	P	V	L	A	P	L	A	G	D	A	X	G	V	I	F	E	A	A	D	E	P	T	V	Y	L	V	G	D	T	V	W	T	S	D	V	E	K	A	L	L	R	F	D	P	N	V	I	I	X	N	T	G	Y	A	Q	I	L	G	F	E	D	S	I	I
Template Known Secondary structure									S	S						T	S	T	T																T	T	S								S			S														S							S		B		B	T	T		S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		S	K	W	T	E	Y	L	N	E	T	L	D	M	W	G	N	D	A	E	V	L	F	M	P	H	T	W	P	.	.	.	.	V	W	G	N	K	H	I	N	D	Y	I	G	K
Query Conservation																														.	.	.	.
Alig confidence															.	.	.													.	.	.	.
Template Conservation															.	.	.
Template Sequence		X	G	T	K	D	I	G	R	X	V	V	R	K	.	.	.	P	E	A	K	I	I	A	V	H	X	D	T	V	N	H	T	A	T	S	R	K	D	V	R	K	F	I	K	G
Template Known Secondary structure															.	.	.	T	T	S						S		S	S	S	S	S	B
Template Predicted Secondary structure															.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions