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Job DescriptionP32717
Confidence99.81%DateThu Jan 5 11:50:40 GMT 2012
Rank35Aligned Residues199
% Identity17%Templatec3r2uC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:metallo-beta-lactamase family protein; PDBTitle: 2.1 angstrom resolution crystal structure of metallo-beta-lactamase2 from staphylococcus aureus subsp. aureus col
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MYQVRGQDI. SNITFVEGEKG. . IIVIDPLVTPPAAKAALDLYFQHRPQKPIVAVIYTHSHTDHYGGVKGIISEADVKSG
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Template Sequence  FKQFYDKHLSQASYLIGCQKTGEAMIIDPIRD. . . LSSYIRVADEE. . GLTITHAAETHIHADFASGIRDVAIKL. . . . .
Template Known Secondary structure  TTTTTTT
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   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  KVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGLLLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKMIIDGLE
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Template Sequence  NANIYVSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ESDDTLGYKNMPNHTHFVQHNDDIYVGNIK
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   73......80 .........90.........100.........110
 
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Query Sequence  FDFLMTPGSEAPAEMHFYIPALK. . . . . . . ALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLF. M
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Template Sequence  LKVLHTPG. HTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLLGSSEIGAKQMFKSIESIKDL. . . PDYIQIWP
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GGGT

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   111....... .120.........130.........140.........150.........160.........170........ .180......
 
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Query Sequence  PHT. . . . . . . . . . WPVWGNKHINDYIGKYRDTIKYI
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Template Sequence  GHGAGSKSLGAIPTSTLGYEKQTNWAFSENNEATFI
Template Known Secondary structure  SB
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   194.....200.........210.........220.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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