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Job DescriptionP32717
Confidence99.96%DateThu Jan 5 11:50:40 GMT 2012
Rank22Aligned Residues197
% Identity18%Templatec3l6nA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:metallo-beta-lactamase; PDBTitle: crystal structure of metallo-beta-lactamase ind-7
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130... ......140.........150.........160.........170.........180.........190..
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Query Sequence  KVTDKMYQVRGQDI. . . . . . . SNITFVEGEKGIIVIDPLVTPPAAKAALDLYFQHRPQKPIVAVIYTHSHTDHYGGVKGI
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Template Sequence  PIKNNLHIYKTFGVFGGKEYSANSMYLVTKKGVVLFDVPWEKVQYQSLMDTIKK. RHNLPVVAVFATHSHDDRAGDLSFF
Template Known Secondary structure 
BTTTTTTTS

SSGGG.S


SSSSTTTT

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   30.........40.........50.........60.........70.........80... ......90.........100........
 
   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  ISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGLLLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTG
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Template Sequence  . . . . . . NNKGIKTYATAKTNEFLKK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGKATSTEIIKTG
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   109110.........120....... ..130.........140
 
   273......280.........290.........300.........310.... .....320.........330.........340.........350.
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Query Sequence  EKMIIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATH. TLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVL
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Template Sequence  KPYRIGGEEFVVDFLGEGHTADNVVVWFPKYNVLDGGCLVKSNSATDLGYIKEA. . . NVEQWPKTINKLKAKYSK. ATLI
Template Known Secondary structure  STT



SSSSS

TTTTTTS

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   141........150.........160.........170.........180.........190.... .....200.........210.. ....
 
   352.......360.........370
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Query Sequence  FMPHTWPVWGNKHINDYIG
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Template Sequence  IPGHD. EWKGGGHVEHTLE
Template Known Secondary structure  SBS.

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   217..220. ........230....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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