Job Description P32717 Confidence 99.94% Date Thu Jan 5 11:50:40 GMT 2012 Rank 27 Aligned Residues 209 % Identity 18% Template c3hnnD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:putative diflavin flavoprotein a 5; PDBTitle: crystal structure of putative diflavin flavoprotein a 5 (fragment 1-2 254) from nostoc sp. pcc 7120, northeast structural genomics3 consortium target nsr435a Resolution 1.80 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	K	V	T	D	K	M	Y	Q	V	R	G	Q	D	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	T	F	V	E	G	E	K	G	I	I	V	I	D	P	L	V	T	P	P	A	A	K	A	A	L	D	L	Y	F	Q	H	R	P	Q	K	P	I	V	A	V	I	Y	T	H	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.								.
Template Conservation																																												.								.
Template Sequence		V	L	P	I	A	T	N	T	K	V	L	R	A	R	S	W	S	R	L	R	F	E	I	E	Y	A	L	E	R	G	T	T	S	N	S	Y	V	I	E	G	D	K	.	T	A	I	I	D	P	P	.	V	E	S	F	X	K	I	Y	L	E	A	L	Q	Q	T	V	N	L	K	K	L	D	Y	V	I	L	G	H	F
Template Known Secondary structure							T	T									S	S		S	S	S	S	G	G	G	T	T													S	S	S	.								.		G	G	G												S		G	G	G							S	S
Template Predicted Secondary structure																																												.								.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	D	H	Y	G	G	V	K	G	I	I	S	E	A	D	V	K	S	G	K	V	Q	V	I	A	P	A	G	F	M	D	E	A	I	S	E	N	V	L	A	G	N	I	M	S	R	R	A	L	Y	S	Y	G	L	L	L	P	H	N	A	Q	G	N	V	G	N	G	L	G	V	T	L	A	T	G	D	P	S	I
Query Conservation
Alig confidence															.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	N	R	I	P	T	F	K	A	L	L	E	.	.	.	.	L	A	P	Q	I	T	F	V	C	S	L	P	A	A	G	D	L	R	A	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D
Template Known Secondary structure			G	G	G										.	.	.	.			T	T																	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure															.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																																									.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																			.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	P	T	K	T	I	V	R	T	G	E	K	M	I	I	D	.	G	L	E	F	D	F	L	M	T	P	G	S	E	A	P	A	E	M	H	F	Y	I	P	A	L	K	A	L	C	T	A	E	N	A	T	H	T	L	H	N	F	Y	T	L	R	G	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	L	N	I	L	P	X	R	G	K	E	T	L	D	L	G	K	G	H	V	L	K	F	L	P	I	P	S	P	R	W	P	A	G	L	C	T	Y	D	V	Q	T	Q	I	L	Y	T	D	K	I	F	G	A	H	I	C	G	D	D	V	F	D	D	N	W	E	S	F	K	E	D	Q	R	Y	Y	F	N	C	L
Template Known Secondary structure		S									S	S						S	T	T											S	S		T	T							T	T	T	T						T	T	T							S		S	B	S	S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
			327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	T	R	D	T	S	K	W	T	E	Y	L	N	E	T	L	D	M	W	G	N	D	A	E	V	L	F	M	P	H	T	W	P	V	W	G	N	K	H	I	N	D	Y	I	G	K	Y	R	D	T	I	K
Query Conservation		.
Alig confidence		.																		.	.	.											.							.
Template Conservation																				.	.	.											.							.
Template Sequence		X	A	P	H	A	I	H	V	E	A	A	L	E	K	I	S	D	L	.	.	.	Q	V	R	L	Y	A	V	G	H	G	.	P	L	V	R	T	S	.	L	I	A	L	T	Q	A	Y	A	D	W	S	K
Template Known Secondary structure		T	G	G	G											T	T	T		.	.	.			S					S	S	S	.	S	B	B	S	S	S	.
Template Predicted Secondary structure																				.	.	.											.							.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions