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Job DescriptionP32717
Confidence99.86%DateThu Jan 5 11:50:40 GMT 2012
Rank33Aligned Residues206
% Identity16%Templatec3aj3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:4-pyridoxolactonase; PDBTitle: crystal structure of selenomethionine substituted 4-pyridoxolactonase2 from mesorhizobium loti
Resolution1.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160. ........170.. .......180.........190.......
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Query Sequence  SNITFVEGEKGIIVIDPLVTPPAAKAAL. . . . . . . . . . . . . . DLYFQHRPQKP. . IVAVIYTHSHTDHYGGVKGIISEAD
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Template Sequence  VYSILIEHAEGRFLIDTGYDYDHVXKVLPFEKPIQEKHQTIPGALGL. LGLEPRDIDVVVNSHFHFDHCGGNKYF. . . . .
Template Known Secondary structure  TT





GGG

B

GGGS.TT

GGG


S

SGGGTTTGGG
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   35....40.........50.........60.........70.........80. ........90.........100........
 
   198.200.........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  VKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGLLLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKMII
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Template Sequence  . . . PHAKKICHRSEVPQACNPQPFEHLG. . . . . . . . . . . YSDLSFSAEAAEARGATAQLLEGTTRANSTFEGIDGDVDLA
Template Known Secondary structure  ...TTSTTS

GGGTTT...........T


TT
T
GGG

TT

STTS

SS
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   109110.........120.........130... ......140.........150.........160.........170....
 
   278.280.........290.........300 .........310.........320.........330.........340.........350....
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Query Sequence  DGLEFDFLMTPGSEAPAEMHFYI. . . PALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMP
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Template Sequence  RG. . VKLISTPG. HSIGHYSLLVEFPRRKPILFTIDAAYTQKSLETLCQAAFHIDPVAGVNSXRKVKKLAEDHGAELXYS
Template Known Secondary structure  TT..
TT.SSTT


SSS

TT
SST


S

S
T
S
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   175. ...180.... .....190.........200.........210.........220.........230.........240.........250.
 
   355....360..
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Query Sequence  HTWPVWGN
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Template Sequence  HDXDNFKT
Template Known Secondary structure  S
TT
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   252.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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