Job Description P32717 Confidence 98.76% Date Thu Jan 5 11:50:40 GMT 2012 Rank 70 Aligned Residues 150 % Identity 17% Template c2ycbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor; PDBTitle: structure of the archaeal beta-casp protein with n-terminal2 kh domains from methanothermobacter thermautotrophicus Resolution 3.10 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																				.	.														.	.
Query SS confidence																				.	.														.	.
Query Sequence		N	I	T	F	V	E	G	E	K	G	I	I	V	I	D	P	L	V	.	.	T	P	P	A	A	K	A	A	L	D	L	Y	F	.	.	Q	H	R	P	Q	K	P	I	V	A	V	I	Y	T	H	S	H	T	D	H	Y	G	G	V	K	G	I	I	S	E	A	D	V	K	S	G	K	V	Q	V	I	A	P	A	G
Query Conservation																				.	.														.	.
Alig confidence																				.	.														.	.		.																												.	.	.	.
Template Conservation																																						.																												.	.	.	.
Template Sequence		S	C	L	Y	L	Q	T	P	N	S	R	V	L	L	D	C	G	V	N	V	A	G	G	D	D	K	N	S	Y	P	Y	L	N	V	P	E	.	F	T	L	D	S	L	D	A	V	I	I	T	H	A	H	L	D	H	S	G	F	L	P	Y	L	Y	H	.	.	.	.	Y	G	Y	D	G	P	V	Y	C	T	A	P
Template Known Secondary structure									S	S												S	S							S			T	T	S	T	T	.			T	T	T							S	S	S	S					T	T							.	.	.	.	T	T			S
Template Predicted Secondary structure																																						.																												.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		F	M	D	E	A	I	S	E	N	V	L	A	G	N	I	M	S	R	R	A	L	Y	S	Y	G	L	L	L	P	H	N	A	Q	G	N	V	G	N	G	L	G	V	T	L	A	T	G	D	P	S	I	I	A	P	T	K	T	I	V	R	T	G	E	K	M	I	I	D	.	G	L	E	F	D	F	L	M	T	P	G
Query Conservation																																																																						.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.											.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		T	R	D	L	M	T	L	L	Q	L	D	H	I	D	I	A	H	R	E	D	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	F	N	V	K	H	V	K	K	S	V	K	H	T	I	T	L	D	Y	G	E	V	T	D	I	A	P	D	I	R	L	T	L	H	N	A	G	.
Template Known Secondary structure																					T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S												T						T	T							T	T										.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290																				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300					.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		S	E	A	P	A	E	M	H	F	Y	I	.	.	.	.	P	A	L	K	A	L	C	T	A	E
Query Conservation													.	.	.	.
Alig confidence		.											.	.	.	.
Template Conservation		.
Template Sequence		.	H	I	L	G	S	A	M	A	H	L	H	I	G	D	G	Q	H	N	M	V	Y	T	G	D
Template Known Secondary structure		.	S	S	T	T									T	T	T	T	T							S
Template Predicted Secondary structure		.
Template SS confidence
			329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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