Job Description P32717 Confidence 99.80% Date Thu Jan 5 11:50:40 GMT 2012 Rank 36 Aligned Residues 197 % Identity 15% Template c2r2dC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:zn-dependent hydrolases; PDBTitle: structure of a quorum-quenching lactonase (aiib) from agrobacterium2 tumefaciens Resolution 1.75 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		S	N	I	T	F	V	E	G	E	K	G	I	I	V	I	D	P	L	V	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	K	A	A	L	D	L	Y	F	Q	H	R	P	Q	K	P	.	.	I	V	A	V	I	Y	T	H	S	H	T	D	H	Y	G	G	V	K
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.						.	.
Template Conservation																																																								.
Template Sequence		V	S	A	Y	L	I	Q	C	T	D	A	T	V	L	Y	D	T	G	C	H	P	E	C	M	G	T	N	G	R	W	P	A	Q	S	Q	L	N	A	P	Y	I	G	A	S	E	C	N	L	P	E	R	L	R	Q	.	L	G	L	S	P	D	D	I	S	T	V	V	L	S	H	L	H	N	D	H	A	G	C	V	E
Template Known Secondary structure										T	T									S		T	T		S	S	T	T		S	S								S		B				T	T		S								.	T	T			G	G	G		S					S			S	T	T	T	S	T	T	G	G
Template Predicted Secondary structure																																																								.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	S	E	A	D	V	K	S	G	K	V	Q	V	I	A	P	A	G	F	M	D	E	A	I	S	E	N	V	L	A	G	N	I	M	S	R	R	A	L	Y	S	Y	G	L	L	L	P	H	N	A	Q	G	N	V	G	N	G	L	G	V	T	L	A	T	G	D	P	S	I	I	A	P	T	K	T	I	V	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	F	.	.	.	.	.	.	.	.	G	K	S	R	L	I	A	H	E	D	E	F	A	T	A	V	R	Y	F	A	T	G	D	H	S	S	P	Y	I	V	K	D	I	E	A	W	L	A	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	W	D	L	V	G	R
Template Known Secondary structure		G		.	.	.	.	.	.	.	.	S	S	S																			T			S	S	S	S									T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																							.	.	.	.	.	.	170	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.															.
Query SS confidence																																.	.	.															.
Query Sequence		T	G	E	K	M	I	I	D	G	L	E	F	D	F	L	M	T	P	G	S	E	A	P	A	E	M	H	F	Y	I	.	.	.	P	A	L	K	A	L	C	T	A	E	N	A	T	H	.	T	L	H	N	F	Y	T	L	R	G	A	K	T	R	D	T	S	K	W	T	E	Y	L	N	E	T	L	D	M	W	G	N
Query Conservation																																.	.	.															.
Alig confidence																					.											.	.	.															.
Template Conservation																					.
Template Sequence		D	E	R	E	R	E	L	A	P	G	V	N	L	L	N	F	G	T	G	.	H	A	S	G	M	L	G	L	A	V	R	L	E	K	Q	P	G	F	L	L	V	S	D	A	C	Y	T	A	T	N	Y	G	P	P	A	R	R	A	G	V	L	H	D	T	I	G	Y	D	R	T	V	S	H	I	R	Q	Y	A	E	S
Template Known Secondary structure		T								T	T								S	S	.	S	S	S	S									S	S	S								T	T	S							S	S	S					S	S		S
Template Predicted Secondary structure																					.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	E	V	L	F	M	P	H	T	W	P	V	W	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	L	T	V	L	F	G	H	D	R	E	Q	F	A	S
Template Known Secondary structure			T						S	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions