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Job DescriptionP32717
Confidence99.97%DateThu Jan 5 11:50:40 GMT 2012
Rank15Aligned Residues228
% Identity16%Templatec2fhxB_
PDB info PDB header:hydrolase, metal binding proteinChain: B: PDB Molecule:spm-1; PDBTitle: pseudomonas aeruginosa spm-1 metallo-beta-lactamase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130... ......140.........150.........160.........170.........180.........190.....
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Query Sequence  LFKVTDKMYQVRGQDI. . SNITFVEGEKGIIVIDPLVTPPAAKAALDLYFQHRPQKPIVAVIYTHSHTDHYGGVKGIISE
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Template Sequence  ATKIDSDVFVVTDRDFYSSNVLVAKMLDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIY. . .
Template Known Secondary structure  TTTTTTT
TTS
S

SS

S


SSSTT...
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   45....50.........60.........70.........80.........90.........100.........110.........120.
 
   196...200.........210.........220.........230.........240.........250.........260.........270.....
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Query Sequence  ADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGLLLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKM
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Template Sequence  . . . KKMGAETWSSDLTKQLRLEENKKDRIKAAE. . . . . . . . . . . . . . . . FYKNEDLKRRILSSHPVPADNVFDLKQGKVF
Template Known Secondary structure  ...TT
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   129130.........140.........150........ .160.........170.........180.........
 
   276...280.........290.........300.........310.........320.........330.........340.........350.....
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Query Sequence  IIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPH
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Template Sequence  SFSNELVEVSFPGPAHSPDNVVVYFPKKKLLFGGMIKPKELGYLGD. . . . . . ANVKAWPDSARRLKKF. . . DAKIVIPGH
Template Known Secondary structure  TT


SSSSTT

TTTT




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TT......

TTTGGGGS...

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   181........190.........200.........210.........220...... ...230.........240.. .......250.
 
   356...360.........370.......
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Query Sequence  TWPVWGNKHINDYIGKYRDTIK
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Template Sequence  G. EWGGPEMVNKTIKVAEKAVG
Template Known Secondary structure  S.

BST
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   264 .....270.........280....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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