Return to main results Retrieve Phyre Job Id

Job DescriptionP32717
Confidence100.00%DateThu Jan 5 11:50:40 GMT 2012
Rank1Aligned Residues623
% Identity45%Templatec2cfuA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sdsa1; PDBTitle: crystal structure of sdsa1, an alkylsulfatase from2 pseudomonas aeruginosa, in complex with 1-decane-sulfonic-3 acid.
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100.........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  KEEAKAATQYTQQVNQNYAKSLPFSDRQDFDDAQRGFIAPLLDEGILRDANGKVYYRADDYKFDINAAAPETVNPSLWRQ
Query Conservation      
 

  
   
      
 
 
  

  
 

 
             
 


    
 
      
 







 
Alig confidence 













































.
































Template Conservation      
 

  
   
      
   
  
   
 

 
       
.    
   
      

     
 







 
Template Sequence  TTAPKPPSAFTVEAQRRVEAELPFADRADFERADRGLIRRPERLLI. RNPDGSVAWQLGGYDFLLDGKPRDSINPSLQRQ
Template Known Secondary structure 

S




S
TT

TT

SS
.
TTS

GGGGGGTT



TTS
Template Predicted Secondary structure 






















.



















Template SS confidence 















































































   20.........30.........40.........50.........60..... ....70.........80.........90........
 
   110.........120.........130.........140.........150.........160.........170.........180.........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  SQINGISGLFKVTDKMYQVRGQDISNITFVEGEKGIIVIDPLVTPPAAKAALDLYFQHRPQKPIVAVIYTHSHTDHYGGV
Query Conservation 
 

   






 










 
 
 

 
 




  
 
 
 


    
   



 





 
 

 

 
Alig confidence 















































































Template Conservation    

   

  














 
 
 
  
 




  
 
 
 


    
 
 



 





 
 

 

 
Template Sequence  ALLNLKYGLFEVAEGIYQVRGFDLANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGV
Template Known Secondary structure  TT

TTSSSSS

SSS


SS




SBS
TTG
Template Predicted Secondary structure 
































Template SS confidence 















































































   99100.........110.........120.........130.........140.........150.........160.........170........
 
   190.........200.........210.........220.........230.........240.........250.........260.........
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  KGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGLLLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIV
Query Conservation               
 


   
      

  

 

 


 



  

    
 
  


     
    
 

  
 
Alig confidence 

























...


















































Template Conservation               
 



    
  ...    
  
 


  


  
     
 
  


     
    
 

  
 
Template Sequence  RGLVEPQQVASGAVQIIAPAGFMEAA. . . IVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIE
Template Known Secondary structure  GGT

TTSSTT...

TTTTTTS
BSTTSB


SSSS



S






S
Template Predicted Secondary structure 








...





























Template SS confidence 















































































   179180.........190.........200.... .....210.........220.........230.........240.........250.....
 
   270.........280.........290.........300.........310.........320.........330.........340.........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  RTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAE
Query Conservation      

 



  

   








 




 


  

    
 








  

   
   

    
 
  

Alig confidence 















































































Template Conservation       
 



  

   








 




 



 

    
 








  

   
   

    
 
  

Template Sequence  GEGEDLVLDGVPFTFQNTPGTESPAEMNIWLPRQKALLMAENVVGTLHNLYTLRGAEVRDALGWSKYINQALHRFGRQAE
Template Known Secondary structure  TTTT
TTSSSSSBTTTT
TTTS
SS


SS
TT





TGGG
S
Template Predicted Secondary structure 






































Template SS confidence 















































































   259260.........270.........280.........290.........300.........310.........320.........330........
 
   350.........360.........370.........380.........390.........400.........410.........420.........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  VLFMPHTWPVWGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYYGSVSHNARAVYNF
Query Conservation 


  
  

 
 
 
   
   

    






 

 
 
  

   
 

  

     
 




   




  
Alig confidence 















































































Template Conservation 





  
  
   
   
   

   







 

 
 
  

   
 

  
         



   




  
Template Sequence  VMFAVHNWPRWGNAEIVEVLEKQRDLYGYLHDQTLHLANQGVTIGQVHNRLRLPPSLDQEWYDRGYHGSVSHNARAVLNR
Template Known Secondary structure 
SSS

STTT

TTTGGGT



T
GGGS
SSS
Template Predicted Secondary structure 




























Template SS confidence 















































































   339340.........350.........360.........370.........380.........390.........400.........410........
 
   430.........440.........450.........460.........470.........480.........490.........500.........
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  YLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDYRWSAELLKQVIAANPGDQVAKNLQANNFEQLGY
Query Conservation 
 






  
 



   
   
 
 

   

  
      






 
   

 


 
  

 
 
 

 



Alig confidence 















































































Template Conservation 
 






  
 



   
   
   

   

  
      


 


 
   

 
 
 
  

 
 
 

 



Template Sequence  YLGYYDGNPATLDPLSPEDSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY
Template Known Secondary structure 
S

S
GGGTS


TT
TT

TT
Template Predicted Secondary structure 





















Template SS confidence 















































































   419420.........430.........440.........450.........460.........470.........480.........490........
 
   510.........520.........530.........540.........550.........560.........570......... 580........
Predicted Secondary structure 


























.

Query SS confidence 





































































.








Query Sequence  QAESATWRGFYLTGAKELREGVHKFSHGTTGSPDTIRGMSVEMLFDFMAVRLDSAKAAGKNISLNFNMSN. GDNLNLTLN
Query Conservation    

  


 


 
 


 
                 
    
 
 
 


   

            
.       
 
Alig confidence 























....









































.








Template Conservation    
   


 


 
 


 
   ....   
             
 
 


   

            
        
 
Template Sequence  QAENAGWRNSYLSAAYELRHGVPR. . . . DQGSADALAAMDTGLLFDYLGVRLDAGAAEGKALSINLRLPDIGENYLLELK
Template Known Secondary structure 
SS


S....



S
B
TT

TTTT
Template Predicted Secondary structure 







....

















Template SS confidence 















































































   499500.........510.........520.. .......530.........540.........550.........560.........570....
 
   589590......... 600.........610.........620.........630.........640.........650.........660
Predicted Secondary structure 




.

























Query SS confidence 










.




























































Query Sequence  DSVLNYRKTLQ. PQADASFYISREDLHAVLTGQAKMADLVKAKKAKIIGNGAKLEEIIACLDNFDLWVNIVTP
Query Conservation 
 

       .   
 


        
  
          
   
 
            
     
 

 
Alig confidence 










.




























































Template Conservation 
 

           
 


           
          
   
 
            
     
 

 
Template Sequence  NSHLNNLRGVQSEDAGQTVSIDRADLNRLLLKEVSAVRLVFEGKLKSSGNPLLLGQLFGMLGDFDFWFDIVTP
Template Known Secondary structure  TTT


TT
S
TTSS
TTS
TTTTB



SS

SSSS
Template Predicted Secondary structure 



























Template SS confidence 








































































   580.........590.........600.........610.........620.........630.........640.........650..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions