|   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | E | E | A | K | A | A | T | Q | Y | T | Q | Q | V | N | Q | N | Y | A | K | S | L | P | F | S | D | R | Q | D | F | D | D | A | Q | R | G | F | I | A | P | L | L | D | E | G | I | L | R | D | A | N | G | K | V | Y | Y | R | A | D | D | Y | K | F | D | I | N | A | A | A | P | E | T | V | N | P | S | L | W | R | Q |
Query Conservation |   |
  |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
| . |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
Template Sequence |   |
T | T | A | P | K | P | P | S | A | F | T | V | E | A | Q | R | R | V | E | A | E | L | P | F | A | D | R | A | D | F | E | R | A | D | R | G | L | I | R | R | P | E | R | L | L | I | . |
R | N | P | D | G | S | V | A | W | Q | L | G | G | Y | D | F | L | L | D | G | K | P | R | D | S | I | N | P | S | L | Q | R | Q |
Template Known Secondary structure |   |
|
| S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|
|  |  |  |  |  |  |  | T | T |  |  |  |
|
| S | S |
|  |  | . |  |
| T | T | S |
|  |  |  |  |
| G | G | G | G | G | G | T | T |
|
|
|
| T | T | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  | . |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | I | N | G | I | S | G | L | F | K | V | T | D | K | M | Y | Q | V | R | G | Q | D | I | S | N | I | T | F | V | E | G | E | K | G | I | I | V | I | D | P | L | V | T | P | P | A | A | K | A | A | L | D | L | Y | F | Q | H | R | P | Q | K | P | I | V | A | V | I | Y | T | H | S | H | T | D | H | Y | G | G | V |
Query Conservation |   |
|   |
|
|   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|   |
|   |
|
|
|
|
|   |   |
|   |
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |
|   |
|   |
|
|
|   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|
|   |
|
|   |
Template Sequence |   |
A | L | L | N | L | K | Y | G | L | F | E | V | A | E | G | I | Y | Q | V | R | G | F | D | L | A | N | I | T | F | I | R | G | D | S | G | W | I | V | V | D | T | L | T | T | P | A | T | A | R | A | A | Y | E | L | V | S | R | E | L | G | E | R | P | I | R | T | V | I | Y | S | H | A | H | A | D | H | F | G | G | V |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|  |  |  |  |  |  | T | T |  |  |  |  |  | S | S | S | S | S |
|  |  |  |  |  |
| S | S | S |  |  |  |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| S | B | S |
|  |  |  |  | T | T | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
  |   |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | I | I | S | E | A | D | V | K | S | G | K | V | Q | V | I | A | P | A | G | F | M | D | E | A | I | S | E | N | V | L | A | G | N | I | M | S | R | R | A | L | Y | S | Y | G | L | L | L | P | H | N | A | Q | G | N | V | G | N | G | L | G | V | T | L | A | T | G | D | P | S | I | I | A | P | T | K | T | I | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|   |
|
|
|
|   |   |
|
|   |   |   |   |
|   |
|   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |
|   |   | . | . | . |   |   |   |   |
|   |   |
|   |
|
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |
Template Sequence |   |
R | G | L | V | E | P | Q | Q | V | A | S | G | A | V | Q | I | I | A | P | A | G | F | M | E | A | A | . |
. |
. |
I | V | L | A | G | N | A | M | M | R | R | A | T | Y | Q | Y | G | T | Q | L | P | K | G | P | Q | G | Q | V | D | M | A | I | G | K | G | L | A | R | G | P | L | S | L | L | A | P | T | R | L | I | E |
Template Known Secondary structure |   |
G | G | T |
|
|  |  |  |  |  | T | T | S | S |  |  |  |  |  | T | T |  |  |  |  |  | . | . | . |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
| B | S | T | T | S | B |
|
|
| S | S | S | S |
|
|
|
| S |
|
|
|
|
|
|
| S |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
  |
  |   |
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | G | E | K | M | I | I | D | G | L | E | F | D | F | L | M | T | P | G | S | E | A | P | A | E | M | H | F | Y | I | P | A | L | K | A | L | C | T | A | E | N | A | T | H | T | L | H | N | F | Y | T | L | R | G | A | K | T | R | D | T | S | K | W | T | E | Y | L | N | E | T | L | D | M | W | G | N | D | A | E |
Query Conservation |   |
  |   |   |   |
|
|   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|
|   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|
|
Template Sequence |   |
G | E | G | E | D | L | V | L | D | G | V | P | F | T | F | Q | N | T | P | G | T | E | S | P | A | E | M | N | I | W | L | P | R | Q | K | A | L | L | M | A | E | N | V | V | G | T | L | H | N | L | Y | T | L | R | G | A | E | V | R | D | A | L | G | W | S | K | Y | I | N | Q | A | L | H | R | F | G | R | Q | A | E |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| T | T | S | S | S | S | S | B |  |  |  |  |  | T | T | T | T |  |  |  |
| T | T | T | S |
| S | S |
|
|
| S | S |
| T | T |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G |
| S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
  |
  |   |
350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | F | M | P | H | T | W | P | V | W | G | N | K | H | I | N | D | Y | I | G | K | Y | R | D | T | I | K | Y | I | H | D | Q | T | L | H | L | A | N | Q | G | Y | T | M | N | E | I | G | D | M | I | K | L | P | P | A | L | A | N | N | W | A | S | R | G | Y | Y | G | S | V | S | H | N | A | R | A | V | Y | N | F |
Query Conservation |   |
|
|
|   |   |
|   |   |
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|
|
|
|
|   |   |
Template Sequence |   |
V | M | F | A | V | H | N | W | P | R | W | G | N | A | E | I | V | E | V | L | E | K | Q | R | D | L | Y | G | Y | L | H | D | Q | T | L | H | L | A | N | Q | G | V | T | I | G | Q | V | H | N | R | L | R | L | P | P | S | L | D | Q | E | W | Y | D | R | G | Y | H | G | S | V | S | H | N | A | R | A | V | L | N | R |
Template Known Secondary structure |   |
 |  |  |
| S | S | S |
|
|  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| T | T | T | G | G | G | T |
|
|
|
|  |  |  |  | T |
| G | G | G | S |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
339 | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . |
  |
  |   |
430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | G | Y | Y | D | G | N | P | A | N | L | H | P | Y | G | Q | V | E | M | G | K | R | Y | V | Q | A | L | G | G | S | A | R | V | I | N | L | A | Q | E | A | N | K | Q | G | D | Y | R | W | S | A | E | L | L | K | Q | V | I | A | A | N | P | G | D | Q | V | A | K | N | L | Q | A | N | N | F | E | Q | L | G | Y |
Query Conservation |   |
|   |
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |
|
|   |
|
|
|   |
|   |   |
|
|   |
|   |
|   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|   |
|   |   |   |
|
|   |
|   |
|   |
|   |   |
|
|   |
|   |
|   |
|
|   |
|
|
|
|
Template Sequence |   |
Y | L | G | Y | Y | D | G | N | P | A | T | L | D | P | L | S | P | E | D | S | A | G | R | Y | V | E | Y | M | G | G | A | E | R | L | L | E | Q | A | R | A | S | Y | A | R | G | E | Y | R | W | V | V | E | V | V | N | R | L | V | F | A | E | P | D | N | R | A | A | R | E | L | Q | A | D | A | L | E | Q | L | G | Y |
Template Known Secondary structure |   |
 |  |
| S |
|
| S |
| G | G | G | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
419 | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . |
  |
  |   |
510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | |
580 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | E | S | A | T | W | R | G | F | Y | L | T | G | A | K | E | L | R | E | G | V | H | K | F | S | H | G | T | T | G | S | P | D | T | I | R | G | M | S | V | E | M | L | F | D | F | M | A | V | R | L | D | S | A | K | A | A | G | K | N | I | S | L | N | F | N | M | S | N | . |
G | D | N | L | N | L | T | L | N |
Query Conservation |   |
  |   |
|
|   |   |
|
|
|   |
|
|
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|
|   |
|
|
|   |
|   |
|
|
|   |
|   |   |   | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
Q | A | E | N | A | G | W | R | N | S | Y | L | S | A | A | Y | E | L | R | H | G | V | P | R | . |
. |
. |
. |
D | Q | G | S | A | D | A | L | A | A | M | D | T | G | L | L | F | D | Y | L | G | V | R | L | D | A | G | A | A | E | G | K | A | L | S | I | N | L | R | L | P | D | I | G | E | N | Y | L | L | E | L | K |
Template Known Secondary structure |   |
 |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S | . | . | . | . |
|
|
|
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | B |
|  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
499 | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | |
|
|
|
. | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . |
  |
  |   |
589 | 590 | . | . | . | . | . | . | . | . | . | |
600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | V | L | N | Y | R | K | T | L | Q | . |
P | Q | A | D | A | S | F | Y | I | S | R | E | D | L | H | A | V | L | T | G | Q | A | K | M | A | D | L | V | K | A | K | K | A | K | I | I | G | N | G | A | K | L | E | E | I | I | A | C | L | D | N | F | D | L | W | V | N | I | V | T | P |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |   | . |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|
Template Sequence |   |
N | S | H | L | N | N | L | R | G | V | Q | S | E | D | A | G | Q | T | V | S | I | D | R | A | D | L | N | R | L | L | L | K | E | V | S | A | V | R | L | V | F | E | G | K | L | K | S | S | G | N | P | L | L | L | G | Q | L | F | G | M | L | G | D | F | D | F | W | F | D | I | V | T | P |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  | T |
|
|
| T | T |
| S |  |  |  |  |  |
|  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  | T | T | S |  |  |  |  |  |
| T | T |  |  |  |  |  |  | T | T | B |
|
|
|
| S | S |
|
| S | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . |
  |