Job Description P32717 Confidence 99.69% Date Thu Jan 5 11:50:40 GMT 2012 Rank 45 Aligned Residues 178 % Identity 16% Template c2br6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aiia-like protein; PDBTitle: crystal structure of quorum-quenching n-acyl homoserine2 lactone lactonase Resolution 1.7 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.											.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																	.	.
Query Sequence		S	N	I	T	F	V	E	G	E	K	G	I	I	V	I	D	P	L	V	T	P	P	A	.	.	.	.	.	.	.	.	.	.	A	K	A	A	L	D	L	Y	F	Q	H	R	P	Q	K	P	.	.	I	V	A	V	I	Y	T	H	S	H	T	D	H	Y	G	G	V	K	G	I	I	S	E	A	D	V	K	S	G
Query Conservation																									.	.	.	.	.	.	.	.	.	.																	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.											.						.	.																					.	.	.	.	.	.	.	.
Template Conservation																																													.																												.	.	.	.	.	.	.	.
Template Sequence		V	W	C	Y	L	L	E	T	E	E	G	P	I	L	V	D	T	G	M	P	E	S	A	V	N	N	I	L	P	K	M	T	E	E	D	R	I	V	N	I	L	K	R	.	V	G	Y	E	P	D	D	L	L	Y	I	I	S	S	H	L	H	F	D	H	A	G	G	N	G	A	F	.	.	.	.	.	.	.	.	T
Template Known Secondary structure										T	T									S		G	G	G	B	T						B		G	G	G	S								.		T			G	G	G		S					S			S					T	T	G	G	G		.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																													.																												.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.									.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	Q	V	I	A	P	A	G	F	M	D	E	A	I	S	E	N	V	L	A	G	N	I	M	S	R	R	A	L	Y	S	Y	G	L	L	L	P	H	N	A	Q	G	N	V	G	N	G	L	G	V	T	L	A	T	G	D	P	S	I	I	A	P	T	K	T	I	V	R	T	G	E	K	M	I	I	D	G	L	E
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	P	I	I	V	Q	R	T	E	Y	E	A	A	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	E	Y	M	K	E	C	I	L	P	H	L	N	Y	K	I	I	E	G	D	Y	E	V	V	P	G	V	Q
Template Known Secondary structure		S	S													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			G	G	G	S		T	T	S							S	S					T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																																				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	F	L	M	T	P	G	S	E	A	P	A	E	M	H	F	Y	I	P	A	L	K	A	L	C	T	A	E	N	A	T	H	T	L	H	N	F	Y	T	L	R	G	A	K	T	R	D	T	S	K	W	T	E	Y	L	N	E	T	L	D	M	W	G	N	D	A	E	V	L	F	M	P	H	T
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		L	L	Y	T	P	G	H	S	P	G	H	Q	S	L	F	I	K	T	E	Q	S	G	S	V	L	L	T	I	D	A	S	Y	.	T	K	E	N	F	E	D	E	V	P	F	A	G	F	D	P	E	L	A	L	S	S	I	K	R	L	K	E	V	V	K	K	E	K	P	I	I	F	F	G	H	D
Template Known Secondary structure							S	S	S	T	T									T	T	T								T	T		S	.	S						S							S																										S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions