Job Description P32717 Confidence 64.02% Date Thu Jan 5 11:50:40 GMT 2012 Rank 164 Aligned Residues 37 % Identity 30% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	H	L	A	N	Q	G	Y	T	M	N	E	I	G	D	M	I	K	L	P	P	A	L	A	N	N	W	A	S	R	G	Y	Y	G	S	V	S	H	N	A	R	A	V	Y	N	F	Y
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	L	R	W	I	A	V	G	K	T	X	E	E	I	A	D	V	E	G	V	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	N	S	V	R	V	K	L	R	E	A	X	K	R	F
Template Known Secondary structure								T	T	T										T	T				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.													.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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